Sesamum indicum (sesame): 105175309 Help Entry 105175309         CDS       T04135                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism sind  Sesamum indicum (sesame) Pathway sind04120   Ubiquitin mediated proteolysis sind04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:sind00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     105175309  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     105175309  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:sind04121]     105175309 Enzymes [BR:sind01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      105175309 Ubiquitin system [BR:sind04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     105175309   Multi subunit Ring-finger type E3    Cul4 complex     Target recognizing subunit (DCAF)      105175309 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 ANAPC4_WD40 zf-RING_2 WD40_like zf-C3HC4_4 zf-RING_UBOX MIOS_WD40 zf-RING_5 U-box YbfN Fanconi_A zf-rbx1 YpoC FapA zf-RING_10 Motif Other DBs NCBI-GeneID:  105175309 NCBI-ProteinID:  XP_011096017 UniProt:  A0A6I9U5N4 LinkDB All DBs Position LG12:complement(3100205..3107359) Genome browser AA seq 678 aa AA seqDB search MGGGSISFGTMVPKVKSELVDSSAQAPPSPAITPSLSFGESEKEQKVDKDMLCPICMQII KDAFLTACGHSFCYMCIVTHLQNKSDCPCCSHFLTANHLYPNFLLNKLLMKISARQIAKI APPLEELRQAFEQGCTTSVKELESLLSLLSEKKSKMEQEEAETNLQILLDFLHCLKKKKI NELDEIQADLQYMKEDINAVERRRIELYRRRDRYSAKLRKLVSDPCSQSVLPSLDDKHGG PTVSRNGITQGQFCMSSSGGSQNRKVDAKSSANNLIPRKDSHSGSDTQNLTQSGLALARK RRVQAQFNDLQDCYLQKRRSWARHTLGQQERGSHGYREGYPEGLEDFQSVLSTFTRYSRM RVVAELRHEDVFHSANIVSSIEFDRDDELFATAGVSRRIKIFEFSTVVNEPADVQCPIAE MSARSKLSCLSWNKYAKSQIASSDYEGIVTIWDVTTRQSVMEYEEHDKRAWSVDFSPTEP SMLVTGSDDCKVKVWCIKQEASALSIDMKANICSVKYNPSSSIHVAVGSADHHIHYYDLR KISQPLHIFSGHRKAVSYVKFLSNSELASASTDSTLRLWDMKANLQRCMFRGHKNEKNFV GLTANSEYIACGSETNEVFVYHKAISKPAARHRFSPDVDETGEDTSSHFISSVCWKSDGS TMVTANSQGTIKVLVLAP NT seq 2037 nt NT seq  +upstreamnt  +downstreamnt atggggggcggaagcatctcgttcggcactatggttcctaaagtgaagtccgagctggtg gattcctccgcccaagcgccgccgtctccggcgattactccgtcgctgtcattcggggag tcagaaaaggagcagaaggtggataaggatatgttgtgtccgatatgcatgcaaataata aaggatgcgtttttgacggcatgtggacatagtttttgctacatgtgtatcgtgactcat cttcagaataagagtgattgcccatgttgctctcatttccttacggccaatcatctctac cctaatttccttctcaataagttattgatgaagatttctgctcgccaaatagctaaaatt gcccctcccctggaagagcttcgtcaggcatttgaacagggatgtacaacttcggtcaaa gagcttgagagcctcttgtctcttctttcagagaagaaaagtaaaatggagcaagaagag gctgagacaaatctacagatacttctcgactttttgcactgtttgaagaaaaaaaaaatt aatgagcttgatgagatacaagccgaccttcaatacatgaaagaagatattaatgcagta gagagacgtcgaatagagttgtatcgaagaagagatagatactctgcaaaattgagaaag cttgtcagtgacccctgttcacagtcagtgttgccatcattggatgataaacatggtggc cccactgtctccagaaacggcattacacaaggtcagttttgcatgagttcaagtggtggt tcgcagaacagaaaagttgatgcaaaatcttctgcaaataatttaatcccaaggaaggat agtcacagtgggtcagacacgcaaaatcttactcaatctggactggcattggctagaaag aggcgggtccaggctcagtttaacgacctacaagattgttacctgcaaaaacggcgatct tgggcaaggcacacactgggacagcaagaacggggatcacatggttatagagaaggttac cctgaaggactagaggattttcagtctgttctgtcaaccttcacaagatacagtcggatg cgagttgtagctgaacttagacatgaagatgtctttcactcggctaatattgtatcaagc atagaattcgatcgagatgatgaattgtttgctacagctggagtatcacgccgtatcaag atttttgagttctcaaccgtggttaatgaaccagctgatgttcaatgtcctatagcggaa atgtccgctagatccaaactgagctgtttaagctggaataagtatgcaaagagtcagatc gctagcagtgactatgaaggcatcgtaaccatttgggatgtgactactcgacagagtgtg atggagtatgaggagcatgacaaacgtgcgtggagtgtggatttttcacctacagaacct tcaatgcttgtgactggaagtgatgattgcaaggtcaaggtatggtgtataaaacaggaa gcaagcgcgctcagtattgacatgaaagccaatatttgttctgtcaaatacaacccttca tccagcattcatgtagctgttggttctgcagatcaccatattcattactacgacttgaga aaaatcagccagccattgcatattttcagtgggcataggaaggcagtatcatatgttaaa tttctgtccaacagtgagcttgcttctgcatctacggacagtactttgcggctatgggat atgaaggcaaatctccaacgatgcatgtttagaggccataaaaatgagaagaattttgtg ggtctaacagcaaacagcgaatacatagcatgtggcagtgaaacaaatgaagtgtttgtg tatcacaaggcaatatctaagccggcagcacggcatcgtttcagccccgatgtcgatgaa actggtgaagacacaagctcacacttcattagttctgtgtgttggaaaagtgacggctca actatggtaacagcgaatagtcaagggacgatcaaagtccttgtactggctccttaa

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