Sesamum indicum (sesame): 105175416
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Entry
105175416 CDS
T04135
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105175416
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105175416
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105175416
NCBI-ProteinID:
XP_011096153
UniProt:
A0A6I9UNN6
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Position
LG12:3181431..3183283
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AA seq
387 aa
AA seq
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MASPPSLPLIVLCLILVSSLSTLTLADSYYYAPSTNKNVMNPIDSCWRAKSNWATNRRAL
ADCAVGFGKNAIGGKFGATYMVTDASDDPVKPKPGTLRYGVIQSKPLWIVFAKSMVITLK
NELMINSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISVHDCKPGKSGLVQDSPIHKG
HRRGSDGDAIDIFDSSDVWIDHCSFARCYDGLIDVIHGSTAITISNNFFSHHDKVMLFGH
DDNNLEDKKIKVTVAFNRFGPGLVQRMPRVRLGYAHVANNRYDQWEMYAIGGSADPTIFS
EGNYFVAPNNPDVKQVTKRETKNGWKNWKWRSSRDKFINGAYFVPSGYGTTAPGYTKIQS
FKVADGAMVPALTSDAGPLSCTTNRAC
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccaccatctctcccacttatagtactctgtctgattctagtttccagttta
tcaacattaacacttgctgattcttattactacgctcctagtactaacaagaatgtcatg
aacccaatagactcatgttggagggctaaatcaaactgggccactaaccgccgtgcactg
gctgattgtgctgtagggtttgggaaaaatgccattggggggaagttcggagcaacttac
atggtaacggatgcatccgatgacccggtaaaaccaaaaccgggcacgctccggtacggt
gtgatccaatcaaaaccactgtggatcgttttcgccaaaagtatggttattacacttaag
aatgagctcatgataaacagttacaagaccatagatgggagaggggcgaaggtggagatt
gcttacgggccatgcatcacgatacagcatgttagccatgttattatacatgggatcagc
gtacatgactgtaagccgggaaaatcaggcctggttcaggacagcccgatccacaagggc
caccgccggggttcggatggcgatgctattgatatatttgattcatccgatgtatggatt
gaccattgctcatttgctcggtgctatgatgggctcattgatgtgattcatggctccaca
gccatcaccatttcaaacaacttcttttcccaccatgataaagttatgttgttcggacac
gatgacaacaatttggaggacaaaaaaatcaaagtcacagtagccttcaaccgttttggc
cctggattagttcaaaggatgccgagggttaggctagggtacgcgcatgtggctaacaac
agatacgaccagtgggagatgtatgcgattggggggagtgctgatccaaccatcttcagt
gaaggaaactacttcgtcgccccgaataatcctgatgtcaaacaagttacaaagagagag
actaagaatggttggaagaactggaaatggagatcatccagagacaaattcatcaacggg
gcttactttgtcccctcggggtatggaaccaccgcgcctggttacacgaaaattcagtcg
tttaaggtggccgatggagccatggtccctgctcttacatctgatgcaggccctctaagc
tgcaccaccaatagagcatgttga
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