Sesamum indicum (sesame): 105175456
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Entry
105175456 CDS
T04135
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105175456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105175456
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105175456
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GFIT
Motif
Pfam:
Transp_inhibit
LRR_SKP2
F-box_5
LRR_At5g56370
LRR_4
LRR_FBXL15
F-box-like
Motif
Other DBs
NCBI-GeneID:
105175456
NCBI-ProteinID:
XP_011096196
UniProt:
A0A6I9UE27
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Position
LG12:complement(3796208..3802233)
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AA seq
588 aa
AA seq
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MDPDQSEDSPSNSANSHGPTQPQSPFPDEVLEKVLSFIDSRKDRSSVSLVRKDWYNAERW
TRSKLFIGNCYSVSPEIVARRFPRIKSVTLKGKPRFSDFNMLPRDWGANVHSWLVMFAKV
YPFLEELRLKRMTVTDESLELLAKSFPRFKALTLSSCDGFSDNGLKAIASHCRNLTELDI
QDSVTDDVGGGWLSCFPENFASLEVLNFSSLNCEVSFDDLERLVGRCKSLRVLKVNDSIT
LDQLRRLLVHAPQLMELGTGSFMQELTPRQYEDIESAFSNCRNLQVLSGLWEATSLYLPV
LYGACASLTFLNLSDVALQSSEFAKLLVHCPNLRRLWVIDTVEDKGLEALGSSCPLLEEL
RVFPSDPYDRHHRDGVTELGFLAVSRGCRKLRYVLYFCRRMTNAAVVTIVQNCPDFTHFR
LCIMTPGQPDYLTNEPMDEAFAAVVKTCTKLKRLSVSGLLTDLTFEYIGKYAKNLETLSV
AFAGSSDWGMQCVLEGCPKLRKLEIRDCPFGNAALLSGREKYEMMRSLWMSSCNVTMKGC
RLLAREMPRLNVEVIKDEGNDDGQADRVYVYRSVAGPRRDAPPFVLTL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggatccagatcaatctgaggactcgccatcaaactcagccaactctcacggaccaact
caacctcaatcaccgttccctgatgaagtgttggaaaaagtcctttcattcatagattca
cgcaaagaccggagttcagtgtcccttgtgcgcaaagattggtataatgctgagagatgg
acgagatcaaagctttttatagggaactgctattcagtgtcaccagaaatcgtggccaga
agatttccaagaattaagagtgttacacttaaagggaagccaagattttctgatttcaat
atgttgccacgggattggggtgctaatgtgcattcttggttggtcatgtttgccaaggtt
tacccttttctagaagagctgagactcaagaggatgactgtaactgatgagagcttggag
ctcttggccaagtcattcccacgcttcaaggctttaactttgtcgagttgtgatgggttc
agtgacaatggcctcaaagccattgccagtcattgcaggaacttgactgagctcgacata
caggacagtgtaacagatgatgttggtggaggttggttaagttgcttcccggagaacttt
gcctcactggaggtactaaacttttccagtctcaactgtgaggtcagttttgatgacctc
gagagactcgttggtcggtgcaaatcattaagggttctgaaggtcaatgatagtattacc
ttggaccaattgcgacggttgctcgtgcatgctcctcaattaatggagcttggtactggc
tccttcatgcaagaacttacgcctcgccaatacgaagacattgagagtgcatttagcaac
tgtagaaatctccaagttctttcaggtttatgggaagcaacttccctttatctccctgtt
ctctatggagcttgtgccagtctgactttcttgaacttgagcgatgtggcccttcaaagt
agtgaatttgctaagcttcttgttcactgccctaatttgcgacgcctttgggtcattgat
actgttgaagacaaggggctcgaggctcttggatccagctgtccgttgctcgaagaactc
cgagtcttcccttctgatccttacgaccggcatcatcgtgatggggtgactgagttgggc
ttcttggccgtgtctcgtggatgtcgcaaactccgctatgtcctctacttttgtcggagg
atgaccaatgctgctgtcgttactatagttcagaactgccctgattttacccactttcgt
ctttgcataatgaccccagggcagccagattacctgacaaacgaacctatggatgaagcc
ttcgctgctgtggttaaaacttgcactaagcttaagaggctttcagtttcaggccttcta
actgatctgacatttgagtatattgggaagtatgccaaaaatcttgagacactttccgtg
gcttttgctggcagcagtgattgggggatgcaatgtgttctcgaaggttgtcctaagttg
aggaagcttgaaatacgagattgcccattcggaaatgcggctctgttgtctggacgagag
aaatatgaaatgatgaggtcgttatggatgtcatcatgtaatgtaacaatgaagggatgc
aggctgcttgcaagagagatgccaagactgaatgttgaagttatcaaagatgagggaaat
gatgacggtcaagcggacagagtttatgtctaccgttcagtagccgggccaagacgtgat
gccccaccatttgttcttactctttga
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