Sesamum indicum (sesame): 105175559
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Entry
105175559 CDS
T04135
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105175559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105175559
03036 Chromosome and associated proteins [BR:
sind03036
]
105175559
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105175559
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105175559
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
105175559
Noncanonical PRC1 (PRC1.1)
105175559
Noncanonical PRC1 (PRC1.3/1.5)
105175559
Noncanonical PRC1 (PRC1.6)
105175559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
RAWUL
zf-RING_4
zf-rbx1
zf-RING_6
zf-Nse
zf-RING_11
zf-C3HC4_5
zf-RING_10
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
105175559
NCBI-ProteinID:
XP_011096337
UniProt:
A0A6I9UEG8
LinkDB
All DBs
Position
LG12:4385187..4390553
Genome browser
AA seq
444 aa
AA seq
DB search
MPAQKRPLETTTPPRSPSPPHEEEKPDDSQQGSEENNHKETDDDCDSDESPYSSDGEKDE
FIVVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
RRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEKARNKQIQASIAQTFRRQAEALGKK
RTSARVTAAAFVRRQGNYRNLRGRRNHRVPEHQGSDEEEGANGNDGSKDTSSADERSPEV
KSKRYKRWGGGRTSQQSSGANGDGGCDDNDSEANRELLGASVGLIAGTEILAWGRGGMRS
NTRHGGLSWAGGKLSRNNRLSKLIDHLRCSNENDELKISLTLVSLLEEKIPSLKRPYLCC
SPRSSVRHLCQYVAMQTSMEVGEIEILIVKDFHPVNNPLSFKNQLVILNPCEHELQLLSE
HQTLGEIHASFTQQNLVLAYRQKA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccaaaagcgtcccctcgaaaccaccactccacctcgttctccttcgccaccg
cacgaggaagaaaaacccgatgattcacagcaaggcagcgaggagaacaaccataaagaa
accgacgacgactgcgattcggatgagagtccttactctagcgatggagaaaaagacgaa
tttattgttgtgaagttggcagagatacgcaaggaagtccagtgtccaatatgtttaggt
atcattaggaagacaaggacagtcatggaatgtttacatcgtttctgcagagaatgcatt
gacaaatccatgcggctagggaataacgaatgtccggcttgccgcacacattgtgctagt
cgccgttctttgcgagatgatccaaactatgatgccctgattgctgctttgtatcccgac
attgataaatacgaggaagaggaactggctttccatgaagaggagaaggctcgtaataag
cagatccaagcttcaattgctcagacttttcgtcgtcaagcagaggcactggggaagaaa
cgtacatcagccagagtcacagcagcggcatttgttaggagacagggcaactatcgaaat
ttgagaggtcggagaaaccatcgagttcctgaacaccaaggatctgatgaagaggaagga
gcgaatgggaatgatggtagcaaagacacgtcgtccgctgatgagcgctctccggaagtc
aaatcaaagagatataaaagatggggaggaggtcggacttcacagcaatcatcaggagcc
aatggagatggaggttgtgatgataatgattcagaggccaacagagaattacttggtgct
tctgttggccttattgcaggtacagaaattcttgcctggggaagaggcggaatgcgtagt
aacacccgacatggcggtctcagttgggcgggcggcaaactttcccggaataaccgactc
tctaagttaatagatcatctgcgatgttcaaatgaaaatgatgagttgaaaatcagtctc
acacttgtttcattgcttgaggagaaaatacccagcctgaagcgtccttatctctgctgc
agccccagatcatcagtaagacacttatgccagtacgtggctatgcagacatccatggaa
gttggtgaaattgagatactaatagtaaaagattttcatcctgtaaacaaccctttgagt
ttcaaaaaccaacttgtcatcttaaacccttgcgaacatgagttgcagctgttgagtgag
catcagacattgggggaaattcatgccagtttcactcagcaaaatctggttttagcatac
cgccaaaaggcgtaa
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