Sesamum indicum (sesame): 105175760
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Entry
105175760 CDS
T04135
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105175760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105175760
03036 Chromosome and associated proteins [BR:
sind03036
]
105175760
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105175760
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
105175760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR41
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
105175760
NCBI-ProteinID:
XP_011096638
UniProt:
A0A6I9UPS1
LinkDB
All DBs
Position
LG12:complement(5366148..5368410)
Genome browser
AA seq
349 aa
AA seq
DB search
MGASSDPNQDGSDEQQRRSEIYTYEAPWHIYAMNWSVRKDKKYRLAIASLLEQYPNRVEI
VQLDDSTGEIRSDPTLSFDHPYPPTKLIFIPDKECQRPDLLASSSDFLRLWQISDSDSGR
RVELKSLLNNNRNSEFSGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKEVVDTQLIAHD
KEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYM
ATIIMDSSKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS
SMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSNKLQILRDK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagcagcgatccgaaccaagacgggtcggatgaacagcaacgccgctccgag
atctacacatacgaagccccatggcacatctacgccatgaactggagcgtacgcaaggac
aaaaagtaccggctcgccatcgccagcctccttgaacagtaccccaaccgtgtggaaatc
gttcagctcgacgactccaccggtgagatccgctccgaccccaccctctcattcgaccac
ccctacccacccaccaagcttatcttcatccccgataaagaatgccagcgcccggattta
ctagcatcatcctccgatttcctccgtctatggcaaatctccgattccgacagcgggagg
cgcgtggagcttaaaagcttgttgaataataaccgcaatagcgagttttcggggccgttg
acttcgtttgactggaacgaagctgagccgaggaggattgggacctcgagtatcgatacc
acttgtacgatttgggatattgaaaaagaggtggtggatacgcagctaattgcccacgat
aaggaggtttacgatattgcctggggcggggttggggttttcgcctcggtttctgcggat
ggttcggttagggttttcgaccttcgagataaggagcattcgaccattatttacgagagc
tcggagccggatactcccttagtaaggcttggctggaataagcaggatccgaggtacatg
gctactattataatggacagtagcaaggttgtggttctggatatacgttttccaacattg
ccagtggtggagttgcagcggcatcaggctagtgtgaacgcgattgcgtgggcgccacat
agttcttgccacatttgcaccgcgggggatgattctcaagctttaatttgggatctttct
tcgatgggacagccagtggagggcgggttggatccaattctggcctacactgctggggcg
gagattgagcagctacagtggtcctcatcacagcctgattgggttgcaattgctttttca
aacaagctacagattctgagggataaatga
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integrated database retrieval system
