Sesamum indicum (sesame): 105175959
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Entry
105175959 CDS
T04135
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105175959
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105175959
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105175959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
Prok-RING_4
zf-ANAPC11
AF_0924
SOBP
Motif
Other DBs
NCBI-GeneID:
105175959
NCBI-ProteinID:
XP_011096907
UniProt:
A0A6I9UB48
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All DBs
Position
LG2:complement(834817..838860)
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AA seq
430 aa
AA seq
DB search
MLKFWVFFCCCFFCLMGAFTAYANVLLKGNNVTLSFEDIEANFSPSIKGSGLCGTLYLAE
PLDACSPLTNRVVPGTNKTRSPFVLITRGGCSFDDKVRSAQAAGFQVAIVYDNENGPLVA
MAGNAAGIKIHAVFVSKDSGETLGKYAGATDMELWIVPSFENSAWSIMAISFISLLAMSA
VLATCFFVRRHRIRRERPQAPRVREFHGMSSRLVKAMPSLIFTAVLEDNCTSATCAICLE
DYNMGEKLRILPCRHKFHAICVDAWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSPST
SVLSSVRSSLVSSSAMQMGPSYSRSPSVSRPQSISTTPHNLHSQSHHQSSYLSTSQSSVA
RGAYLVSPHSLGYPSLSSLNSRYMSPYIPSPVNASSSYVGSSSRQANALHYSESAASLSP
FASAQSLPDC
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaattctgggtattcttctgctgctgctttttctgtttaatgggcgctttcaca
gcttatgccaatgtgcttttgaaaggcaacaacgttactttgtcttttgaagacattgaa
gctaatttttctccatcaattaaagggtcaggactttgtgggacgctatatctggcagaa
cctttggatgcatgctcaccacttactaacagagttgttccaggaacgaacaagaccagg
tctccatttgtgttgataaccagaggaggatgtagctttgatgacaaagtcagaagtgcg
caagctgcaggattccaagtagccattgtctatgacaatgaaaatggtcccctggttgca
atggctggaaatgctgctggtataaagatacatgcagtgtttgtttctaaagattctggt
gaaacactgggaaaatatgccggtgctactgatatggaactgtggatagtcccaagcttt
gaaaactcagcatggtctatcatggccatctctttcatttcattgcttgctatgtctgct
gttttagctacatgtttctttgtccgaaggcatcggattagaagagaacggcctcaagct
ccacgtgttcgcgaattccatgggatgagcagtcgtttggtgaaagccatgccaagtcta
atttttacagctgttctggaggacaattgtacttcagcaacatgtgccatatgtcttgaa
gactataatatgggagagaagctaaggattctaccatgtcgccacaaatttcatgctatc
tgtgtcgatgcctggctaacatcatggagaactttctgtcctgtgtgcaagcgtgatgca
agaacaagtactggtgaaccaccagcatcagaatctacaccattgctgtcacccagcaca
tctgtcttatcatctgttagatcatcgttagtgtcatcatcagccatgcaaatgggcccc
tcatattctcgatctccctcagtttcacgccctcagtccatctctaccactcctcataat
cttcattctcagtcccatcatcaatcctcttatttaagtacaagtcagagctctgtcgca
cgtggtgcttatttagtttcacctcattcgttgggctacccatcgttatcatccctcaat
tctagatacatgtctccatatattccaagtccagtgaatgcctcatcgagttatgttgga
tcttcaagccgtcaggctaatgcactgcattatagtgagtcagctgcaagcttgtcacca
tttgcttcggctcaatcacttccagattgttag
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