Sesamum indicum (sesame): 105176296
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Entry
105176296 CDS
T04135
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105176296
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105176296
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105176296
NCBI-ProteinID:
XP_011097349
UniProt:
A0A6I9UG07
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Position
LG13:3411229..3413842
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AA seq
406 aa
AA seq
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MISSPFLLVLLLFLLNLGTPILASSSSLQDPDIVVQDVHKSINASRRNLGYLSCATGNPI
DDCWRCDPNWEQNRQRLADCAIGFGKNAMGGKGGRIYVVTDSGDDDPVNPRPGTLRHAVI
QDGPLWIIFRRDMVIRLNQELVMNSHKTIDGRGASVHIAGGACITIHHVTNVIIHGIHIH
DCVKAGNGIIRDSPEHKGWWEVSDGDGISIFGGRDIWVDHCSLSNCNDGLIDAIHGSTAI
TISNNYFTHHDKVMLLGHSDEYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTIYSQGNRFLAPNDRDRKQVTKHEDAPESEWRHWNWRSEGDLMLNG
AYFLQSGTGAGATYARASSLSARPSSLVASITTAAGALNCKRGARC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgatctcttcgccctttctactcgtgctattactattcttgctcaatcttggaactcca
atcctcgcctcatcctcctcccttcaagacccagacatcgtggtccaagatgtacataag
agcatcaatgcatcgcgaagaaacttaggttacctctcctgcgcaaccggcaaccctatc
gacgattgctggcggtgcgaccccaactgggagcagaaccgtcagcgcttggcggactgc
gccatcggtttcggcaaaaatgccatgggcgggaaaggcggtcgcatctacgtcgtcacc
gactccggcgatgacgacccagtcaacccacggcccggcaccctccgccacgccgtgatt
caagacgggccactgtggataatcttcaggagagacatggtcattcggctcaaccaagag
ctcgtcatgaactcacacaagaccatcgacggccgcggagccagcgtccacatcgccggc
ggagcgtgcatcaccatccaccacgtgactaatgtaattatccatggcattcacatacac
gactgcgtgaaagcggggaacgggatcatcagggactcgccggagcacaaagggtggtgg
gaggtgtcggacggcgacggcatttcgatcttcggcggtagggatatctgggtggatcat
tgttctctgtcgaattgcaatgatgggttgatagatgcgattcatgggtctactgcaatt
acaatttcgaacaattatttcactcatcatgataaggtgatgctgttagggcacagtgat
gagtatacgcaggacaagaacatgcaggtcactattgcttttaatcattttggagaaggc
ttagttcaaaggatgcctaggtgcaggcatgggtattttcatgtggtgaacaacgattat
actcactgggaaatgtatgcaattggtgggagtgcttctccaactatctacagccaaggg
aataggtttcttgcacccaatgacagagacaggaaacaagtgacgaagcacgaggacgca
ccggaaagtgagtggaggcactggaactggaggtcggagggggacctgatgttgaacggc
gcatatttcctgcagtcggggactggggcgggggctacatacgcaagggcatcaagtcta
agcgcccgcccctcttctctggtggcctccatcaccaccgctgctggtgcacttaattgc
aagaggggagcccgttgctag
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