Sesamum indicum (sesame): 105176351
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Entry
105176351 CDS
T04135
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105176351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105176351
03009 Ribosome biogenesis [BR:
sind03009
]
105176351
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105176351
Spliceosome [BR:
sind03041
]
Complex A
U1 snRNP components
U1 related factors
105176351
Complex B
105176351
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
Helicases
105176351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
105176351
NCBI-ProteinID:
XP_011097425
UniProt:
A0A6I9U8Y7
LinkDB
All DBs
Position
LG13:complement(3632714..3638824)
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AA seq
779 aa
AA seq
DB search
MAATASSASVRYAPEDPTLPKPWRGLVDCKTGYLYFWNPETNITQYERPVASLHATALPS
QESLSSSVQTTPGHCWKNESEDRYNQGSNGGSEKVASGAGTNQTARIRSDYSLNDPNLRT
GTAHGPFASKGAETGLSAESYRLRHEITVTGDNVPQPFSSFEATGFPSEILREVKSAGFS
APTPIQAQSWPIALRGRDIVAIAKTGSGKTLGYLIPGFIHLKQRHNNPKLGPTVLVLSPT
RELATQIQDEAVKFGKSSRISCTCLYGGAPKGPQLKDLDRGVDVVVATPGRLNDILEMNR
VSLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPSRRQTLMYTATWPKEVRRIAADLLVN
PVQVNIGNVDELAANKSITQYVEVLSPMDKRRRLEQILRSQEPGSKIIIFCSTKKMCDHL
AGNLTRQFGAAAIHGDKSQGERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYDF
PTGIEDYVHRIGRTGRAGATGVAYTFFCDQDARHASDLVKLLEGANQKVPVEVRDMASRG
GGMGRGRRQWSSGPSGQFDSSYSGRDGGRGGWGMSSSPDRGLSGGYDYKQHERHGAGSFE
QDTNATGSFHYKSFHESMMAAAKDGGTSGSSPNRNFGWVENQGRARSRSPERFGGAAPTR
RSFHETMMEQARPLPSTNEQTLPHGNANTKESKSCDGPQSHCEQSISTPDVNEKETVGAS
HNNAGQELGESSPRQSGNEEFGHGLDTNDRDEEDKGMLLAEENRHLSSCWGIHIVQVRL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactgcctcatctgctagtgtacggtatgcgccggaggaccccaccctccca
aaaccatggagaggacttgttgattgtaagactggatatttgtacttctggaatccagag
accaatataacccaatatgagagacctgttgcctccttgcatgcaaccgctctaccgtct
caagaatctctgagttcatctgttcaaacgaccccaggacactgctggaaaaatgaaagt
gaagacagatataaccaaggtagcaatggtggctcagagaaggttgcttctggagcagga
actaatcagactgccagaatccgatcagattactcactgaatgatccaaatttgagaact
ggcactgcacatgggccatttgcatctaaaggtgcagaaactggtttgtctgccgagtct
tatcgtcttcgccatgaaattactgtaactggagataatgtgccccagccattctcctca
tttgaagccactggttttccttcagagattttacgggaggtaaaaagtgctggcttttct
gctccaactccaatccaggcgcaatcatggcccattgctcttcgaggtcgtgatatagtt
gccattgctaagacagggtctggcaagactttgggttacttgattcctggatttattcat
ttgaaacaaaggcataataatcctaaattaggcccaacggttttggttctctcaccaaca
agagagttggctactcagatacaagatgaagctgtgaagttcggaaaatcatctaggata
tcttgtacgtgtttatatggaggtgcacctaaaggtcctcagttgaaagacttggacaga
ggtgtggatgttgtggtggctactcctggtcgattgaatgatattctggagatgaataga
gttagcctccatcaagtgtcatatttggtattagatgaggcagacaggatgctggacatg
ggttttgaaccccagataaggaaaattgtgaaggaggtgccttctcgtaggcaaaccctg
atgtacacggcgacatggccgaaggaagtgcgcagaattgctgctgatttactggttaac
cccgttcaagttaacatcggaaatgttgatgagcttgctgcgaacaaatcaataacccag
tatgttgaagttttatcaccaatggataagcgccgacgcctggaacaaatattgagatct
caagaaccaggatcaaagataattattttctgctctacaaagaaaatgtgcgaccacctt
gcaggtaacctaacccggcaatttggagctgctgctattcatggtgacaaatctcagggt
gagagggatcatgttttgaatcaatttcgcacgggaaggtccccggtgcttgtagccact
gatgttgctgctcgaggactggacattaaggatatcagggtggtgataaattatgacttc
ccaacaggaatagaggactatgttcacagaattggaagaactggacgagcaggtgccact
ggggtggcttatacttttttctgtgaccaagatgcaagacatgcatcagatcttgtcaaa
cttttagaaggagcaaaccaaaaggttcctgttgaagttcgtgatatggcttcacgtggt
ggtggaatgggaaggggaaggcgccagtggagctctggccctagtggacagtttgattcc
tcgtacagtggaagggatgggggaaggggaggttggggcatgtcatcatctccagataga
ggtctttccggcggttatgactacaagcagcatgaaagacatggtgctggatcctttgaa
caagacacgaatgctacaggaagcttccattataagagctttcacgagagcatgatggct
gctgcaaaagatggaggtacaagtggcagtagccccaacaggaattttggatgggttgag
aaccaaggtagagcccgtagccgtagccctgagagatttggtggagcagctcctaccaga
cgtagttttcatgaaactatgatggagcaggctcgaccattgccatctaccaatgagcaa
accttacctcatggcaatgctaatacgaaggaatctaagagttgtgatggcccacagagt
cattgtgagcaatcaatctccacacctgatgttaacgaaaaggaaactgttggagcatca
cataacaatgctgggcaggaattgggagaatcatctcccaggcaatcaggaaatgaagag
tttggccatggattagacaccaatgaccgggatgaggaagataaaggtatgctgttagca
gaagaaaacaggcatcttagcagctgttgggggattcatattgtgcaagtaagactttga
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