Sesamum indicum (sesame): 105176371
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Entry
105176371 CDS
T04135
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105176371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105176371
03012 Translation factors [BR:
sind03012
]
105176371
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105176371
Translation factors [BR:
sind03012
]
Eukaryotic type
Release factors
105176371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
105176371
NCBI-ProteinID:
XP_011097457
UniProt:
A0A6I9UG75
LinkDB
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Position
LG2:complement(1087923..1090675)
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AA seq
437 aa
AA seq
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MSDGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVARVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALSELLESDDKFGFIIMDGNGTLFGTLSGNTREILHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPQTSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKVLEMGAVETLIVWENLDITRYVLKNTSTGELIIKHFNKDQEIDQKNFRD
AATNAELEVHEKMSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDV
RAFDELSDDGEIYEDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatggtcatgaaactgacaagaacattgagatatggaagatcaagaagcttatc
aaggcactggaagctgctcgaggtaatggtaccagtatgatttctcttatcatgcctcca
cgtgatcaagttgctcgtgttacaaagatgctgggggatgaatttggaactgcgtctaac
atcaaaagtagagtgaatcgccaatctgttcttggtgcaattacatctgctcagcagagg
ttgaaattgtataacaaggtacctccaaatggacttgtgctttacactggaaccattgtt
accgaggatggaaaggagaaaaaagtaacaattgatttcgagcccttcaggcctatcaat
gcatcgctctatctctgtgacaataagttccacactgaggcactgagtgaacttctagaa
tctgatgacaagtttggctttattattatggacgggaatggaaccttgtttggaacattg
agtggtaatacgagagaaattcttcacaaattttctgttgacctccccaagaaacatgga
agaggaggtcagtctgctttgcggtttgcccgtctacgaatggagaagcgtcacaactat
gtgaggaaaacggcagagctggccacccaattttacatcaatcctcagaccagccagccc
aatgtgtcgggacttatacttgctggctcagctgacttcaagactgagctcagtcaatct
gatatgtttgatcctcgtcttcaggccaagattttgaatgtagttgatgtttcttatgga
ggggaaaatggtttcaaccaggcaattgagctttccgctgagatcttatccaatgtgaaa
tttatacaagagaagcgtttgataggcaagtactttgaggagattagccaggacactggg
aagtatgtttttggcgttgatgacacattgaaagttctcgaaatgggtgctgttgagaca
cttattgtgtgggagaatctggacataactagatatgtgctcaagaatacctccactggt
gagcttatcattaaacacttcaacaaggaccaggagattgatcagaagaactttcgggat
gcagccacgaatgctgaattggaggttcacgaaaagatgtcactgcttgaatggttcgcc
aatgaatatagacgttttggttgcacacttgaattcgtcaccaacaaatcgcaagagggt
tctcagttttgccgaggttttggaggaataggaggaattcttcgctaccagttggatgtt
cgagcatttgatgaactttctgatgatggagaaatttatgaagattctgaatag
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