Sesamum indicum (sesame): 105176489
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Entry
105176489 CDS
T04135
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105176489
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105176489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
FlgT_M
DUF3829
IZUMO
Motif
Other DBs
NCBI-GeneID:
105176489
NCBI-ProteinID:
XP_011097607
UniProt:
A0A6I9UGI7
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Position
LG13:4955974..4961962
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AA seq
525 aa
AA seq
DB search
MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELVVATWDKQFHSSDIAQKVPL
LYLANDILQNSKRKGNEFVTEFWKVLPSALKEVANKGDDRGKNVVSRLVGIWEERRVFGS
HAQSLKDAMLGEELPPPLEFKKKRSRSVRIVKKDSRSIRTKLSIGGTAEKIVSAFHSVLS
EQTNEDEEMSKCKSAVHRVKKLEKDVDAALTKAKDPSRKTLAKELEEEENTLKQCIDKLK
VVETNRVVLLSELRDALHEQESELENLRTQIQVAQAQVEEATNMRIRLDEDHVFESKPSC
TSTDASAKQEQTSKKSAAAIAAEVADKLAASSSSQYIMTSVLSTFAAEEAKNAGLTTSST
STTSFSLSFNSPMSKSENLRPISDPNVFMPPQLTPPQNNPYQSIVVPQPSIPGQISSSQA
HYHSIPNPTSLQYMQPSGGIAGSYDYGSLPPLPPGPPPPAPPSFMVSPMVPLMQQPLTMG
HQQSTLAQQQSIPISQPPPGPAGFRPLAPMQAPGMVYYTHPYQSQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgttttcagtgaacagatacttgccgacaagctttcaaagctcaatagcact
cagcaatgtattgaaactttatcgcactggtgcatatttcaccgtagcaaagcagaactg
gttgttgcaacatgggataaacaattccacagttcggatatcgcccagaaagtacctctt
ctgtaccttgcaaatgatatactgcagaacagcaaacgaaaaggaaatgaattcgtcacc
gagttctggaaggttcttccttcagcactgaaggaggtagcaaataaaggcgacgatcgt
ggaaagaatgtagtatccagactggtgggcatatgggaagaaaggagagtttttggatcc
catgctcaaagcctgaaagatgcaatgcttggagaagaattgcctccacctttagagttc
aagaagaaacgctctcgttccgtgagaatagttaaaaaggattcaagatctatcaggacg
aaattgagcattggtggtacggcggaaaaaatcgtgtcagcttttcattcagtgctcagt
gaacaaaccaatgaagatgaagaaatgagtaaatgcaagtctgctgttcatcgtgtgaaa
aagctggaaaaagatgttgatgcggcattaacaaaagcaaaggatccatcacggaagacc
ctagccaaagaattggaggaggaagaaaatactttgaaacaatgtatcgacaaacttaaa
gttgttgaaacaaatagagttgttcttttatctgagttgcgagatgcacttcatgagcag
gaatctgaactggagaatctacggacacagattcaggttgcacaggcacaagtagaagaa
gccacaaacatgcggatacgattggatgaagatcatgtattcgagtcaaaaccatcatgt
acttcaacagatgccagtgcaaaacaagagcaaacatctaaaaaatctgctgcagcaatt
gcagctgaggtagcagacaagcttgcagcttcgagctcctcccagtacatcatgacgtcg
gtcctttctacatttgcagctgaagaagccaaaaacgctgggctgacgacatcttcaaca
tcaaccacttctttctcattgtcgtttaacagtccaatgtcaaaatccgaaaacctccgg
cctatttcagatcctaatgttttcatgcctccccaactaactcctccacagaacaaccct
taccaatccattgtcgtgccccagccctcaattccaggtcaaatttccagctcacaagcc
cactatcattcaattcctaacccgacatctctgcaatatatgcagccatcgggtggaatt
gcgggatcatatgattatggtagtcttccccctttgccacccgggccacctccgccagcc
cctccctcattcatggtgagcccaatggtccctttgatgcagcaaccattgacaatgggc
catcagcaatcaacactagctcagcagcaatctataccgatatctcaaccgccacctgga
cctgctggttttcggcccctagctccaatgcaggcacctggaatggtgtattatacccac
ccttatcagtcacagtga
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