KEGG   Sesamum indicum (sesame): 105176508
Entry
105176508         CDS       T04135                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105176508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105176508
   03041 Spliceosome [BR:sind03041]
    105176508
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105176508
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105176508
Spliceosome [BR:sind03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    105176508
SSDB
Motif
Pfam: RRM_1 RRM_7 PHM7_cyt T7SS_signal Cut8
Other DBs
NCBI-GeneID: 105176508
NCBI-ProteinID: XP_011097631
UniProt: A0A6I9UGJ6
LinkDB
Position
LG13:4997240..5002058
AA seq 475 aa
MELTKARRNICLSPGSNQGPLVCETSVITNYTTQTLLFLIIIKHKEVGRIQILILLSSLN
RPSSASAASSAVAMAKTKLKRRKLVKKSAADTTPKIEKKLKKQKKKTKLSKSGSDSDSDP
NTKIQTLLEPFSKDQLITLVSDLSLSHASLFSLLKSAADRDISHRKIFVHGLAWDSTRQS
IESVFGAYGEIEELNVVNDRNTGKCKGYAFITFKTRKSAKKLLKNPRVRVANRITSCQLA
SEGPAAPGAGGIVSQQHFSSSDYPQRKIYVSNVPVNASAEKLRGFFEKFGEIENGPKGLD
PTTGKFKGYAIFVFKTVEGARSVLEEPYKMFEGNQLHCQKAAEGKNKVAGGSASITTALQ
PVQPQMLAAVAAAQQVQNMALLGQQTGMVNPLYGGGMIANTNLGALMGGYYGMMGGQIPG
LGLSAYGVSGASDGGTSGAMLQGLQYMYPSGQNGQSSSSLAKASGTSGRGYSPSL
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggaactgacaaaagctcgtagaaatatatgtctgagcccgggttcgaaccagggacct
ctagtgtgtgagactagcgtgataaccaactacaccacccagaccttgctgtttctcatc
attataaaacacaaagaagtaggccgcatacagattcttatcttgttgagttcgttaaat
cgcccgagttctgcgtctgctgcatcatctgcagtagcaatggctaaaaccaaattgaaa
cggcgaaagctggtgaagaagtccgccgccgatacaactcccaaaatcgagaaaaagctc
aagaagcagaagaagaaaaccaagctctccaaatctggctccgattcagactccgacccc
aataccaagatccaaaccctactcgaacccttctccaaggatcagctcatcactctcgtc
tccgacctctctttatctcacgcttcccttttctccctcctcaagtccgccgccgaccgg
gatatctcacaccgcaagatttttgtccacggtctcgcttgggattccacccgccaatct
attgagtcggtttttggggcttatggtgagattgaggaacttaacgtggtgaatgaccgc
aatacagggaaatgtaagggctacgcttttattaccttcaaaacccggaaatctgctaag
aagttgttgaaaaaccctagggttagagttgcgaatcgtataacctcgtgccagctggcg
tctgagggccctgcagcaccgggtgccggcggaatagtttcgcagcagcatttctcgtcg
tcggattatccgcaacggaagatttatgtgagtaatgtgccggtcaatgcgagcgcggag
aagttgaggggtttcttcgagaaatttggagagattgagaatgggccgaaggggttagac
cccactactgggaaatttaaagggtacgccattttcgtgtttaagactgtggaaggagca
aggagtgttttggaggagccgtataagatgtttgaaggtaatcaattgcattgtcagaag
gcggccgaggggaaaaataaagtggctggtgggtctgcgtctattacgactgcgttgcag
ccggtccagccccagatgctggctgcagtggctgcagcgcagcaggtgcagaacatggct
ctgttggggcagcaaacaggaatggttaatcctttgtacggtggtgggatgattgcgaat
acaaacttgggtgcattaatgggaggttattatgggatgatggggggtcagataccaggc
ttgggtttaagtgcatatggtgtttccggtgccagtgatggtgggacgagtggggcaatg
cttcaagggttgcaatatatgtacccaagtggacagaatgggcaaagttcttcatcctta
gctaaggcttctgggactagtggaagaggctactctcccagtttatga

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