Sesamum indicum (sesame): 105176530 Help Entry 105176530         CDS       T04135                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism sind  Sesamum indicum (sesame) Pathway sind03018   RNA degradation Brite KEGG Orthology (KO) [BR:sind00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     105176530  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sind03019]     105176530 Messenger RNA biogenesis [BR:sind03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      105176530   mRNA degradation factors    5'-3' decay     Decapping complex      105176530 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  105176530 NCBI-ProteinID:  XP_020554478 UniProt:  A0A8M8V5Z9 LinkDB All DBs Position LG14:106444..114374 Genome browser AA seq 804 aa AA seqDB search MDGYGGGGSTQDSAGLQDLRPFGTNSSGNAVFDASQYEFFGGDVVEEVELGGLEDEEDNL PPVGLEEEEFQFEKEEGDVLGSLSDIDDLSSTFSKLNKVVSEPTSGGVNRGWGSRESSSA AELAQDADFANWFDQRAFDAEVHESKKWSSHPYASPPHFMGTNSLHRTSSYPEQQQQYPP QQPKLHHNYSSEPILIPKSSFTSYPPPGGRSQQASPSGQSSHLNIPYHPPIASPNLSPFS SSQVHLNNLSHGPQFGGNLPQLPHGLQVNSQLQNQWASRSSLYPGNHSGHPNNFSPQQLS HQNGLLPAQLMPPQHSQQTRMQNPYQSSFSHLSGVQSQLFNPHLPPSPPLMNNFDMLGLP DLRDQRAMSLLRSRQGMRYPHQGSDSGSQKSDSGWPRFKAKYMTEDEIENILRMQLAATH SNDPYVEDYYHQACLARKSAGAKLRHHFCPTNLRDGSSKARASNEPHPFLQVDALGRVSF SSIRRPRPLLEVESANSSGSGCAESKLSEKPLEQEPMLAARVTIEDGLSLLLDIDDIDRF LQFNQFPDGGGQLRQRRQVLLEGLASSLQLVDPLGKNGHTVDLAPKDDLVFLRIVSLPKG RKLLVRYLQLLPFRNLRFLFGNLPSDTGASATTSNLAKTVSACVQVMELKALAACLASVV CSAEHPPLRPIGSPAGDGASVILKSVLERATELLTDPHAAGNCSPPNRAFWQASFDAFFG LLTKYCFNKYDSVVQSFLSQGPSEATIGADVAKAISKEMPVELLRASLPHTSEQQRKLLL EFAQRSMPVLGFGGQSGGSAQMNP NT seq 2415 nt NT seq  +upstreamnt  +downstreamnt atggatggatatggaggtgggggaagtacgcaagattcagccgggcttcaggatcttagg ccgtttggtacaaattcgtcagggaatgctgtatttgatgcttcacagtatgaattcttt ggtggcgatgtggtggaggaagttgagctcgggggattagaagatgaagaggataatctt cctccggttgggctcgaggaagaagaatttcaatttgagaaggaggagggagatgttttg ggatcgctatctgacattgatgatctttcaagcacgttttcaaagttgaacaaagttgtc agtgagccaaccagtggaggagtcaatagaggctggggatccagagaaagttcatctgct gctgagttggcacaagatgcggatttcgctaattggtttgatcagcgtgcttttgatgcc gaagttcatgaaagcaaaaaatggtcctcacatccatatgcctctccgccccattttatg ggaaccaattcgttgcaccggacatcgtcataccctgagcaacagcagcagtatccacca cagcagccaaagctacatcataactattctagtgaaccaatacttattccaaaatcttca ttcacttcatatccaccccctggtggcagatctcagcaagcttcaccaagtggccaatct agccatcttaatattccatatcacccaccgattgcttcgcctaatctttctcctttctcc agttctcaggttcatttgaataacttgtctcatggaccacagtttggtggaaatttgcct cagttacctcatggtctccaagttaatagtcaactccagaaccaatgggcgagtaggagt agtttataccctgggaatcattctggccatccaaacaatttttcaccccaacagttatcc catcagaatggtttactgccagcacagctgatgccaccccagcattcccagcaaacaaga atgcagaatccatatcagtcatcctttagccatttatcaggggtgcagtctcaactattc aatcctcacctacctccatcaccacctctgatgaacaacttcgatatgcttgggttgcca gatttaagagatcagagagctatgtcactgttgcgaagtagacaagggatgcgttatcct catcagggctctgattctggcagccagaaaagcgacagcgggtggccaaggtttaaagcg aagtacatgaccgaagatgagattgaaaatattctcagaatgcagcttgcagctactcat agcaatgatccttatgttgaagattactaccatcaagcttgcctagcaagaaaatctgct ggtgctaagctgagacatcatttctgtccaactaatttgagggatggttcttccaaagct cgtgcaagcaatgagccacacccatttctccaggtcgatgctcttggaagggtttccttc tcctcaatacgcaggccgagaccacttcttgaagttgaatccgctaattcatctggtagt ggctgtgctgaatcaaaactttctgagaagcctttggaacaggagcctatgcttgcagcg agggtgactattgaggatggacttagcctcctacttgatattgatgatattgacagattc ttacaatttaatcagtttccagatggtgggggccagttgagacagaggagacaggttctg ctagaaggtttagcatcgtctcttcagcttgttgacccactaggcaaaaatggccacact gtggatttagctcccaaagatgaccttgtgttcctaaggatagtttctcttcccaagggc aggaagctccttgtgagatatctacaacttcttcccttccgcaatttgaggttcttattc ggtaaccttccttctgatactggagcgtctgcgacaactagcaatcttgcaaagactgtg tcagcctgtgtccaagttatggagcttaaagctcttgctgcctgtcttgcatcagtcgtg tgctcagctgagcatcctccactgcgtcccatcgggagtcctgccggagatggagcttct gttattcttaaatctgtacttgagagggcaaccgagctgcttacagacccacatgctgct ggaaattgcagcccgcctaacagggcattttggcaggcctcttttgatgcattttttggc ctgctcacgaagtactgctttaacaaatatgactctgttgtacagtcgtttctcagtcag ggcccatctgaggcaaccattggggctgatgtagccaaagcgattagtaaggaaatgcct gttgagttattgcgagcgagccttccgcacacaagcgagcaacagaggaaactactccta gaattcgcacaacgatctatgcctgtgttgggttttggtggtcagagtggaggaagcgct caaatgaacccataa

DBGET integrated database retrieval system