Sesamum indicum (sesame): 105176604
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Entry
105176604 CDS
T04135
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105176604
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105176604
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105176604
NCBI-ProteinID:
XP_011097774
UniProt:
A0A6I9USL0
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Position
LG14:532415..534033
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AA seq
435 aa
AA seq
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MALNLYRFSSLLLFFILFPLSATLPKAFAKIAEFDEDLRRRAAESYQESLKAYNPNPLNL
TGESYLFAEQRRDMKEDDCKAENPIDRCWRCDPDWDKNRKKLADCARGFGHTTSGGKDGK
YYVVDDPSDDDMDLPKPGTLRHAVLQTEPLWIIFKHSMVIKLKNELLMTSDKTIDGRGVL
VHIAYGAGITIQFVHNVIIHNIWVHNIVPTSGGMIRDTMTHIGLRTQADGDAISIYSSNH
VWIDHCSLSKATDGLIDVIEGSTAITISNCKFNRHNDVMLLGAHDSNSKDAIMQVTVAFN
KFGKGLIQRMPRVRWGFAHVVNNDYQQWELYAIGGSAHPTIVSQGNRFRASNYPYTKEVT
KRDYATKEEWMKWQWRSEGDLFKNGAYFRESGPPLSQNKANPLEGQNLIKYRPGSFVGKL
TRWAGALRCRKGKLC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaatctttatcgattttcatcgctcctcttgttcttcatcctgttcccgctt
tctgccactctgccgaaagctttcgccaagatcgccgaatttgatgaggatctgcgcagg
agggctgccgagtcctaccaggagtccctcaaggcctacaatccgaaccctcttaatctc
accggtgaatcctacttattcgctgagcagaggagggacatgaaggaagatgattgcaag
gctgagaaccccattgatcgttgctggaggtgtgaccctgactgggataagaacaggaag
aagttggctgattgcgcaagagggttcgggcacaccacctctggtgggaaagatgggaag
tactacgtcgtggatgatccatccgatgacgacatggacctccctaagcctggaactctt
cgccatgccgtcctccagactgagcccttgtggatcatcttcaagcacagcatggtgatt
aagctcaagaacgagctgcttatgactagtgataagacgattgatggaaggggcgtactg
gtccatattgcgtatggggcgggaattactattcaatttgtgcacaacgttataatccat
aacatttgggttcacaacattgttcccacctcgggtggaatgatcagggacacgatgacg
catatcggcctacgtacgcaggccgacggtgatgccatcagcatttacagttcaaaccac
gtatggatcgaccattgctccctgtctaaagcaaccgacgggctaatcgacgtgattgaa
ggttccacggccatcaccatctccaactgcaagttcaacaggcacaacgacgtgatgctc
ctgggcgcacacgacagcaactccaaagacgcgatcatgcaagtgacggtggcgttcaac
aagttcggaaaagggctgatccagaggatgccaagagtacgatggggtttcgcccatgtg
gtgaacaacgattaccagcagtgggagctgtacgccatcggcggaagcgcgcacccgacc
atcgtcagccagggcaacaggttcagagcctcaaactacccgtacacgaaggaggtgacg
aagagagattacgccacaaaggaggagtggatgaaatggcaatggcgatcggaaggcgat
ctgttcaagaacggagcatacttcagagaatcagggccaccactatcacagaacaaggcg
aatccactggaaggtcagaatttgatcaagtacagaccaggatcgttcgtgggaaagctc
acacggtgggctggtgctctcaggtgccggaagggcaaactctgttga
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