Sesamum indicum (sesame): 105176615
Help
Entry
105176615 CDS
T04135
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105176615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105176615
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105176615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
105176615
NCBI-ProteinID:
XP_011097787
UniProt:
A0A6I9UD16
LinkDB
All DBs
Position
LG14:complement(605588..610703)
Genome browser
AA seq
475 aa
AA seq
DB search
METDQGKLFIGGISWDTNEERLKEYFGAYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA
ERVVKEKHMIDGRTVEAKKAVPRDDQHLINRNSGSIQGSPGPGRTKKIFVGGLASTVTET
DFKDYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELKGKMVEVKR
AVPKELSPGPSRGPLVGYNYGFGRANNFLNTYPQGYNLSSLGGYGVRMDGRYSPLASARG
GFSQFGSPAYGMGVNMEQGLNAGFGGGSNFSGNVGYGRVVNPYFGSNQGRSTPIGYNTSS
NRGDSFFNSSSRNVWGNGGLNSSANNANSGSYFGSGSGGFGVFGNNGANWGASPIAPSLG
GTSSSYSGGNVGYRGGENSYALGAGGFGRNSGAGVATTSSFSASSGGYEGSYGDFYRSGS
VYGDPTWQTASSELDNSGSFGYALGNSEEVTAKDSEDYGVGYDIPNRKSSRGIAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagacggatcaaggtaagctctttattggtgggatttcttgggacacgaatgaggaa
cgtcttaaagaatattttggggcatacggggaggtggtggaggcagtgatcatgagagat
cgaaccacgggccgtgctcgtggcttcggctttgtagtctttgccgaccctgcggttgct
gaaagagtggttaaagagaagcacatgattgatggacgaactgttgaagcaaagaaagct
gttccaagagacgaccaacacttgataaatagaaacagtggcagcattcagggatcacca
ggacctggacgcactaaaaagatttttgtaggagggttagcatctacagtcactgagacc
gactttaaagattactttgatcagtttggaaccataacagatgttgtagtgatgtacgac
cacaacactcaaaggccaagaggttttgggtttataacatatgattcagaggatgcagtg
gatagggtattgcacaaaacctttcatgaactcaaaggtaagatggttgaggtaaaaaga
gcagttcccaaagaattgtctccagggcccagccggggcccacttgttggttacaactat
ggttttggcagagcaaacaacttccttaatacttacccccagggatataatctaagctca
cttggaggctatggtgtccggatggatggaagatacagcccattggctagtgcgcgtggt
gggttttctcagtttggttctcccgcttatggaatgggtgtgaatatggagcaggggttg
aatgcgggttttggtgggggctcaaactttagtggcaatgtaggttatggccgtgttgtg
aacccctattttggcagtaaccagggcaggtctactcctattggttacaatacaagtagc
aaccgcggtgattcctttttcaactcatcatccagaaatgtgtggggaaatggtggcctt
aatagttcggcaaataatgccaactccggttcatactttggttctggaagtggtggtttt
ggagtattcggaaataatggagcaaattggggcgcttctcctattgccccctcacttggg
ggaacttcttccagctatagtgggggaaatgttggttacagaggtggagaaaatagctat
gcactgggagcaggaggatttggaagaaacagtggagcaggtgtagccacaacatcttca
ttttctgcctcaagcggtggttatgagggatcttatggggacttctatcgcagtggctct
gtttatggtgatccaacgtggcaaactgcatcttccgagctggataattcaggttcattt
ggttatgcacttggaaattcagaagaagtcacagctaaagattctgaggattatggggtg
ggctatgacattccaaatcgaaaatccagtagaggaattgctgcttag
DBGET
integrated database retrieval system
