Sesamum indicum (sesame): 105176628
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Entry
105176628 CDS
T04135
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105176628
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105176628
Factors involved in mRNA localization
Other mRNA localization factors
105176628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
105176628
NCBI-ProteinID:
XP_011097806
UniProt:
A0A6I9UD32
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All DBs
Position
LG2:complement(1302572..1323030)
Genome browser
AA seq
1287 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDDQPEIQGPGFWVSTERGATNSPIEYNDVSAYRLSLSEDTKA
INQLNLLIREGKEMGSVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELNFALLFPERHILLRILPVLVVLAASSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSTYFPKFSAQTRLLTLPSPHELPPREAQDYQRHFLIINHIGAI
RAEHDDFSIRFASALNQLVLLRSMDGADMEWAKEVKGNIYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKDPVSTESHETAASFSDYEKVVRFNYSADERKALVELVSYIKGIGSLMQKS
DTLVADALWETVHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKPD
SEMQAFQHGGEESRGSYFYPRPVAPTAAQVHCLQFLIYEVVSGGNMRKPGGLFGNAGSEI
PVNDLKQLETFFYKLGFFLHILDYTATIANLTDVGFLWFREFYLESSRVIQFPIECSLPW
MLVDHVIESQNAGLLESILMPFDIYNDAAQQALVVLKQRFLYDEIEAEVDNCFDIFISKL
CDTIFTYYKSWAASELLDPSFLFALDIGEKFSIQPMRFTSLLKMTRVKLLGRTINLRSLI
SERINKVCRENIEFLFDRFESQDLCAIVELEKLLEILRLAHELLSKDLTLDSFSLMLTEM
QENVSLVSYSSRLASQIWTEMQNDFLPNFILCNTTQRFVRSSRVPPVPVQKPSLPQAKPS
FYCGTQDLNSAYQSFARLHSAFFGMPHMYSIVRLLGSRSLPWLIRALLDHLSNKITILEP
MISTLQEALPKSIGLLPFDGGVAGCIKIVQDYLNCWRSKSELKIEALRGIKEIGSVLYWM
SLLDIVLREIDTSQFMQTAPWLGLVPGVDGQVVQFHDGEDSPIISLFKSVAAASISNPSF
SNPSSFRVLSRQAEAADLLYKSNINAGSVLEYSLAFMSAALDKYCNKWSIVPKTGFVDIT
TSKDFYRIYSGLQMEYLEESVQVQPSNHGMLGDSVAWGGCTIIYLLGQQLHFELFDFSHQ
VLNVAEVEVAAITPAHKNPHFVQGLEGVLEAMKKARRLNNHVFSMLKARCPLEDKQACAI
KQSGAPLHRIKFENTVSAFETLPQKGA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggctgttccagtagaggaagccattgctgcattatccactttttcgttggaggatgat
caaccagaaattcagggacctgggttttgggtgtcaactgaacgaggtgcaactaatagt
ccaattgaatacaacgatgtttctgcctatcgattatctttgtctgaggacacaaaagcc
ataaatcagctgaatttgcttatacgagagggcaaggaaatgggttcggtgctctatacc
taccggagttgcgtaaaagcactgcctcagcttccagattccatgaagcaaagtcaagct
gatttgtatctagaaacttaccaagttttagatttagagatgagccgtttgcgtgaaatt
cagcgttggcaagcatcagctgcgtcgaaactagcagctgatatgcaacgtttttctagg
cctgagagacgcatcaatggtcctactataacacatctctggtctatgctgaagttacta
gatgtactcgtccaacttgatcatctaaagaatgcaaaggccagcattcctaatgatttt
tcttggtacaagaggacatttacacaagtcagcgtgcagtggcaagatactgattccatg
agggaagagctagatgatttacagatctttttgagcacaaggtgggcaattttgttgaat
ttgcacgttgagatgttccgtgtcaataacgttgaagacattctccaagttctcatagtt
tttgctgttgagtcgctggagttaaactttgctcttctatttccagagcgccatattctt
cttcgcattttgcctgttcttgttgtcttggcagcttcatcagagaaagatagtgagtcc
ctgtacaagagagtgaaaatcaacagattgatcaatatatttaagaacgatccagtcatc
ccagcatttccagatcttcatctttctcctgcagcaatactaaaagagttatcgacatac
tttccaaaattttctgctcaaactcgtcttcttactcttccttcacctcatgagcttcca
cctcgtgaggcacaagattatcagcgtcactttttgatcatcaaccatattggggcaatt
cgtgctgaacatgatgacttctccattcgctttgcttctgccttgaatcagcttgtgtta
ttgaggtcaatggatggtgcagatatggagtgggcaaaggaagtcaaaggaaatatctat
gatatggtcgttgaaggttttcaactcttaagtagatggacagcacgtatatgggagcag
tgtgcatggaaattttcccggccatgcaaagatcctgtctccacagaatcacatgagaca
gcagcatccttttctgactacgagaaggtggtacggtttaattatagtgcagatgaaagg
aaagctctggttgaacttgtgagctacataaaaggaattgggtcattaatgcagaagtct
gatacattggtggcggacgccttgtgggaaactgttcatgcagaggttcaagatttcgtg
caaaatacacttgccactatgctgcgaactaccttccggaagaagaaagacctttctagg
attctttctgatatgagaacactttcagctgactggatggcaaatacaagcaaacctgat
tctgaaatgcaagcattccagcatggaggtgaagaaagtagagggagctatttttatcca
agaccagtggcaccaacagcggcacaggtccattgcttacaattcttgatatatgaggtg
gtatcaggtggcaacatgaggaagcctggtggcctttttggcaatgctggttctgaaatt
ccagtcaatgatttaaaacagctggaaaccttcttctacaagctcggttttttcttacac
atattagactatacagcaacaattgcaaatttgacagatgttggtttcttgtggttcagg
gaattttatttggaatcttctcgcgttatccagtttcctattgagtgctcccttccatgg
atgctggtggatcatgtgatagaatctcaaaatgcaggtcttcttgagagtatcttgatg
ccctttgacatctataatgatgctgctcaacaggcactggtggtcctcaagcaacgattc
ctttatgatgaaattgaagctgaggttgataattgctttgacatatttatatcaaaattg
tgtgacaccatcttcacatactacaagagttgggcagctagtgaactgctggatccatca
ttcctcttcgctttagacattggtgagaaattttcaatccaaccgatgagattcacttca
ctgttgaaaatgaccagagtgaagttgcttggaaggactataaacttgagaagtttgatc
tccgagaggataaataaagtatgcagggagaacattgaatttttgtttgatcgattcgag
tctcaggatctatgtgccattgtggaattggaaaagctccttgaaatcttgagacttgct
catgaattactttccaaagatctgacacttgattcatttagtctcatgttgactgagatg
caagagaatgtatctctggtttcatattctagcagacttgcttctcagatttggacggag
atgcaaaatgacttcttaccaaactttatcctatgtaatacaactcagcgcttcgtcaga
tcatcgagagtgcctcctgtacctgttcagaagccgtcacttccgcaagcaaagccaagc
ttctattgtggtactcaagacctgaattctgcatatcagagttttgcccggttacacagt
gcattctttggaatgcctcatatgtattccattgtcagacttctgggatccagatcatta
ccatggctcattcgagcgctgttagaccatttatccaataagattacaatccttgaacca
atgatcagcacactgcaagaagctttgcccaaatctataggattgcttccttttgatggt
ggtgtggcaggttgtataaagatcgtccaagactaccttaattgctggcggtcaaaatca
gaactgaagattgaggctctccgcggaataaaggaaattggaagtgtcttatattggatg
agtctgcttgatattgttctgagagaaatagatactagccaattcatgcaaactgcaccg
tggctggggctagttccaggtgtagacggacaagttgtgcaattccatgatggtgaagat
agccctatcattagtctattcaaatctgtagcagctgcaagtatttcaaatcctagcttc
tcaaatccatcatccttccgagttctgtcaaggcaggcagaagctgctgatctgctatac
aaatcgaacatcaatgctggaagtgtactggaatattcacttgcttttatgagtgcggct
ttagacaagtattgtaataagtggagcattgttcccaagacaggatttgtggacattaca
acttccaaggacttctatcgtatatacagcggcctccaaatggagtacctagaggaatcg
gtccaggtacaaccaagcaatcatggaatgttgggtgattcagttgcttggggtggctgt
acgatcatatacttgcttggccaacaactgcattttgaactttttgacttctcccatcaa
gtcctcaatgttgcagaggttgaggttgcagcaatcacaccagcccataagaatcctcac
tttgtccagggtttggaaggcgtactcgaagctatgaagaaggctaggaggctaaacaat
catgtcttttcaatgttgaaagcgcggtgcccattggaggacaagcaagcttgtgcaatc
aagcaaagcggtgctccactccaccgaataaagtttgagaatacagtctctgcctttgag
acattgccacagaaaggtgcctga
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