Sesamum indicum (sesame): 105176698
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Entry
105176698 CDS
T04135
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105176698
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105176698
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
Helicases
105176698
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
DUF6291
Motif
Other DBs
NCBI-GeneID:
105176698
NCBI-ProteinID:
XP_011097892
UniProt:
A0A6I9UA55
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All DBs
Position
LG14:1257544..1264181
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AA seq
764 aa
AA seq
DB search
MRRPKSKKFKLQSRLSEVKEIELLESWIASGKPDSGSNPLSLPPPPKGAPIGRLPDGSFS
PYAGSEKFSQLPLSKRTKDGLADAKYSKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAF
VIPVLEKLYRARWGPEDGVGCIIMSPTRELAGQLFEVLKSVGKHHGFSAGLLIGGRKDVD
AEKERVNELNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDVGFKKELNAIISQ
LPKHRQTLLFSATQTKSVQDLARLSLKDPEYLSVHEESATATPNRLEQTAMVVPLDQKLD
MLWSFIKAHLNSRILVFLSSCKQVRFVFETFKKLRPGIPLKCLHGRMNQERRMGIYAQFC
EKRSILFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYLSGGRSILFLMPS
ETKMLDKLQEKKIPIRFIKANTKRLQPVSGLLAALLVKYPNLQYLAQRAFITYLRSIHKQ
RDKEIFEVTKLPIDEFAASLGLPMTPKVRFLKQKVKDKKVLEGLTLVPESNSDKNASELL
GGTLATGTPKKAELELDEVLATGRPEKAELELGEGFLLEKDAQHVEEATDIRVDVPATRV
LKKKKLKINVHRPVGTRVVFDDEGNTLPPLAKLADTKTGSDSVNLDKDKVSQRYAELREE
MKVVDKVDKALDRQRRKEKRIKEKMKWKRGRDEEEGDVESEDISGSDGEATNGRRNKKAK
VYFDSDSDDGETKKAQDNAGLVTSAITLAEQEELALKLLSSMHS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagaagacctaaatcgaagaaattcaagctacagagccgcctctcggaggtgaaagag
atcgaattgctcgaatcatggatagcttcggggaagcccgactcaggttccaacccccta
tcactccctccgccgccaaaaggggcaccgatcggcagactaccagacggctccttctcg
ccttacgctgggtcggagaagtttagtcaattgcctctgtccaagagaacgaaagatggg
ttagcggacgcgaagtattcgaaaatgaccgacattcagagggcttctctcccacattcg
ctctgcgggcgggatatactcggagctgcgaaaactggttctggcaagactttggcgttt
gttattccggttttggagaagctatacagggctagatgggggccagaggacggggtggga
tgcatcatcatgtctcccacaagggaattagcgggccagctttttgaagtattaaaatct
gttgggaagcaccatggcttcagtgctggccttctgattggtggccgtaaagatgttgat
gcagagaaagagcgtgtaaatgagttgaacattctggtctgcaccccaggaaggcttctt
cagcacatggatgagactcctaattttgagtgttcacaacttcaggtgttggttcttgat
gaggcagatcgtattcttgatgtgggatttaagaaggaattaaatgcaataatatctcaa
ttaccaaaacatagacagaccttactattctccgccacccaaacgaagtcagttcaagat
cttgcaagactaagtctgaaagatccggagtacctgagtgtacatgaggagtctgcaact
gctactcctaatcgtttggagcagacagctatggttgttcctcttgaccaaaagctggac
atgttgtggagttttataaaggcacatcttaattcgagaatattggtatttctttcaagc
tgcaagcaggtaagatttgtatttgaaacattcaagaaactccgacctggtattccattg
aaatgtctccatggaaggatgaatcaggagagacggatggggatttatgcacaattttgt
gagaagcgttctattctgttttccactgatgttgcgtcaagagggcttgatttcaacaag
gctgttgattgggttgtccaggtggattgcccagaagatgtcgcttcttacatacacaga
gtggggaggactgctcgttacctttctggtgggagatccatcttattccttatgccgtca
gagacaaagatgctagacaaattacaagaaaagaagataccaattcgatttattaaggca
aatacaaaaagattgcaacctgtctctggtttgttggcagctttgttggtcaagtacccc
aatctacagtatttggctcagagagcctttataacttatttgagatccatccataaacag
cgtgataaagagatttttgaagtcactaaacttccgattgatgaattcgctgcatcattg
ggtcttcccatgacccccaaggtccgttttctcaaacaaaaagtcaaggacaaaaaagtc
ctggaaggtttgaccctggtaccagaaagcaattctgacaagaatgcttcggaactctta
ggaggaactttggccactggcactcctaaaaaagcagaactggagctggatgaggttttg
gccactggcaggcctgagaaagcagaactggagctgggtgagggttttcttctggaaaag
gatgctcagcatgtggaggaagcaactgatatcagagttgatgtgcctgccactagggtt
ttaaagaaaaagaagttgaagatcaatgtgcatagacctgtgggtaccagggttgtgttt
gatgatgaaggcaacaccttaccgccacttgcaaaactagctgacaccaagactgggtct
gattctgttaacctggacaaggacaaagtaagtcaaagatacgcggagttgagagaagaa
atgaaagttgtggacaaggtagataaagccttggaccggcaacgtcggaaagaaaagcgc
atcaaagaaaagatgaagtggaagagaggtagagatgaggaggaaggtgatgtagaaagt
gaagatatctctggttcagacggagaagcaactaatggcagacgtaataagaaagccaag
gtctactttgacagtgacagtgatgatggtgagacgaagaaggcccaggataatgctggc
ttggtaacatctgccattacactggccgagcaagaggaattggctcttaagttattgagt
tcaatgcattcatag
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