Sesamum indicum (sesame): 105176706
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Entry
105176706 CDS
T04135
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03030
DNA replication
sind03410
Base excision repair
sind03420
Nucleotide excision repair
sind03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105176706
03410 Base excision repair
105176706
03420 Nucleotide excision repair
105176706
03440 Homologous recombination
105176706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sind03032
]
105176706
03400 DNA repair and recombination proteins [BR:
sind03400
]
105176706
Enzymes [BR:
sind01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105176706
DNA replication proteins [BR:
sind03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
105176706
DNA repair and recombination proteins [BR:
sind03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
105176706
NER (nucleotide excision repair)
GGR (global genome repair) factors
105176706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
SoFic-like_C
Motif
Other DBs
NCBI-GeneID:
105176706
NCBI-ProteinID:
XP_011097901
UniProt:
A0A6I9UH37
LinkDB
All DBs
Position
LG14:1328154..1336457
Genome browser
AA seq
1079 aa
AA seq
DB search
MAKMGFSAQATPFRASSFCPPYFRFCRSCTQFYSFSSSSRVSCRLEDRAPQSANGLLSDR
ILSSDSIELNQRSSYSTYQHNESQMLYRQRNNYASSQWEKPLVYRRVDRRVEDNREVSYG
LYPPGHTAEAWGRATEECRQNKELFAYRNNASANLKTLTEEDVAGKAKSGRRNIYEREGS
GLRRAEKEYTQSGGDHGLRVSHNQMSLVQAGCSTVSDTNDADKKIVFDSCSVKKGVLPNG
LENKGRKGSITNKVKKEAKPAAKKTVLSDTVSEPLSEKITASGGTELHERLSQVYDTVLV
VDSIPAARQVVSKLTNEYKNLIHACDTEVANIDVKEETPVDHGEIICFSIYSGPEADFGD
GKSCIWVDVLDGGGKDLLKEFAPFFEDPSIKKVWHNYSFDNHVIENYGLKVSGFYADTMH
MARLWNSSRRTEGGYSLEALTGDSQIMSDAKKGPGEKVIGKVSMKNIFGRKKLKKDGSEG
KLITIPPVEELQRVERKLWISYSALDSISTLRLYESLEKKLRKTPWSVDGHSKGSMFDNY
VKYLQPFGELLVKMETEGMLVDRLYLAEIEKVAKAEQQVAADRFRKWASKYCPDAKYMNV
GSDAQLRQLFFGGVQNSKDQNEFLPVEKDFKVPNVDNIIEEGKKNPTKYRKIILRKPDGV
NIETDKYTASGWPSVSGDVLKNLAGKVSADFDFLDEDNDEELPENVTHKSSDKNTAGLGI
DTSACGAAYSAFGGGQAGIEACHAIAALCEVCSIDSLISNFILPLQGNHISGKNGRIHCS
LNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLAN
CKSMLDAFKAGGDFHSRTAMNMYPHIREAVERKDVLLEWHPQPGEDKPPVPLLKDAFASE
RRKAKMLNFSIAYGKTTVGLARDWKVSREEAQETVDRWYSDRQEVLSWQEQRKKEARKYR
SVHTLLGRARHFPSLKNASSAHRAHIERAAINTPVQGSAADVAMCAMLQISKNARLKELG
WRLLLQVHDEVILEGPTESAEEAKAIVVDCMEKPFDGKNFLRVDLAVDAKCAQNWYSAK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatggggttctctgctcaggctaccccttttcgggcttcctctttttgcccg
ccgtacttccggttttgccgttcctgtacgcagttttactcattttcttcttcgagcaga
gtctcatgcaggttggaagatagagcgccccagagtgcaaatggtctcttatctgacagg
attctcagttccgattcaattgagttaaaccaaagatcgagttacagtacatatcagcac
aatgaaagtcaaatgctttatagacaaagaaacaattatgcatcttctcagtgggaaaag
cctttggtttatagaagggtggacaggagagtggaagataatagagaagtttcgtatgga
ttatatcctccaggacatactgcagaagcctggggtagagctaccgaagagtgtagacag
aacaaggaactatttgcgtatagaaataatgcatctgcaaatcttaaaacacttacagaa
gaagatgttgcaggaaaagccaagtctgggagaagaaacatatatgaaagagaagggagt
ggattacgcagggcagagaaggaatatactcaaagtggtggagaccatgggcttcgtgtt
tcccataaccaaatgtctctggttcaagcgggatgtagcacagtgtcagacacaaatgat
gctgataaaaagatagtgtttgacagctgttcagtaaagaaaggtgttctccccaacgga
ttggaaaataagggacgaaaaggttccataaccaacaaggtcaaaaaagaagctaaacct
gctgccaaaaagactgttttaagtgatactgttagtgaacctctaagtgagaaaatcact
gcttctggaggcacagagcttcatgagaggcttagtcaggtctatgacacggttcttgtg
gttgatagcatcccagcagctaggcaagtagtcagtaagctcacgaatgaatacaaaaat
ctcattcacgcatgtgatacagaggtggcaaacattgatgttaaagaagaaacaccagtt
gaccatggagaaattatttgttttagcatatattctggtccagaggctgattttggtgat
ggaaagtcctgtatctgggtcgatgtgctcgatggaggtggaaaggatcttctgaaagag
tttgctccattttttgaagacccttccattaaaaaagtgtggcacaattatagctttgat
aatcatgtaatagagaattacggacttaaagtttctggtttctatgctgataccatgcac
atggctcgattatggaattcctctaggcgaacagagggggggtattctctagaagcactc
actggtgattctcagatcatgtctgatgctaagaaaggccctggtgagaaggtgattgga
aaagtatcaatgaagaacatatttggcaggaaaaaattgaagaaagatggatcagaggga
aaactgatcaccattcctcctgttgaagagctacaacgagttgagagaaaattatggatt
tcttattctgctttagattcaataagcacattgaggctttacgaaagtttggagaagaaa
ctaaggaaaaccccctggagtgttgatggacattccaaaggatcaatgtttgataactat
gtaaaatatttgcagccatttggtgagcttcttgtaaaaatggagacagagggaatgctg
gttgatcgtttatatcttgctgagattgaaaaggtggctaaagctgagcagcaggttgca
gctgatagatttcgcaaatgggcatcaaagtattgccctgatgcaaaatacatgaatgtg
ggaagtgatgcacagttgcggcagttattttttggtggtgtacagaacagcaaggaccaa
aatgagtttcttccagtggagaaagattttaaagttcccaacgtagataatataattgag
gaaggcaagaagaatccgacgaaatatcgaaaaatcatattgcgcaagcctgatggtgtt
aacattgaaacggataaatacactgcaagtggttggccttctgttagtggagatgtttta
aaaaatcttgctgggaaggtgtctgctgactttgacttcctggatgaagacaatgatgaa
gaactgcctgaaaatgtgactcataaatcttctgacaaaaacacagcaggtctaggtata
gatacgtctgcttgtggagcagcttactcagcatttggtggtggacaagcaggaattgag
gcttgtcatgccattgctgctttatgtgaagtttgttcaatagactccttaatatccaat
tttattctccctttacagggcaatcatatttcaggcaagaatgggagaatccattgttct
ttgaatattaacactgaaaccggacggttatctgcaagaagacctaatttgcagaaccaa
ccagcactggagaaagatcgttacaagattcggcaggcatttatagctgcacctggcaac
tctctgatagtagctgattatggacaattagaacttaggattcttgcacatctggcaaac
tgtaagagcatgttagatgcttttaaagctggtggtgatttccactcgaggactgctatg
aatatgtatccacatattcgtgaagctgttgagcgaaaagatgtgcttcttgagtggcat
cctcaacctggggaagataaacctccagtgcccttgctaaaggatgcttttgcttctgaa
agaaggaaggcaaagatgctcaacttttccattgcatatggaaaaactactgtgggactc
gctcgcgattggaaggtttctcgtgaggaagctcaggaaacagtggaccgctggtacagt
gacagacaagaagtgttgtcttggcaggaacagcgtaagaaagaagcgcgtaaatatcga
tctgttcacacgttgctaggacgtgctcgccacttcccatctctaaagaatgccagctct
gctcatagagctcacattgaacgtgctgcaataaataccccagtacagggaagtgctgca
gatgtcgccatgtgcgccatgttgcaaatatcaaagaatgcacgtctcaaggagctaggg
tggagacttctattacaggttcatgatgaagtgatcctagaagggccgacagaatcggct
gaggaggccaaggctatagtggttgactgcatggagaagccatttgatgggaaaaatttt
cttagagttgatttagctgtcgatgccaaatgcgctcaaaactggtattctgccaagtag
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