Sesamum indicum (sesame): 105176875
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Entry
105176875 CDS
T04135
Name
(RefSeq) coiled-coil domain-containing protein 94
KO
K28527
splicing factor YJU2
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105176875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105176875
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105176875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Saf4_Yju2
SKAP
Benyvirus_14KDa
DUF2529
Motif
Other DBs
NCBI-GeneID:
105176875
NCBI-ProteinID:
XP_011098112
UniProt:
A0A6I9UDU4
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All DBs
Position
LG14:3362345..3367708
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AA seq
335 aa
AA seq
DB search
MGERKVLNKYYPPDFDPAKIPRRRQPKNQQMKVRMMLPMSIRCGTCGNYIYKGTKFNSRK
EDVVGETYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYVVESGATRNFEPWRAEDEELEE
EQKKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDAMLEALQHSN
EQKKRKLEEEDEALIKSVFKGQREAAVVRRIDDDDIDDEEDLNYFSPDNGGTSTGPSKRK
VPEEHPSNPTDALTTAGVGDSSNNQDNAGASGASNNGKFIFKSSSVRVSIVKKSAADSNG
NMPSKESEKQDANSTAVTNSGLLSLCQQYGSDEDE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaggaaagttctgaacaaatactatccgccggacttcgatccggccaagatt
ccgcggcggaggcagcccaagaaccagcagatgaaagtgcggatgatgcttcccatgagt
attcgttgcgggacgtgcgggaattacatatacaaggggaccaaattcaattcccgcaaa
gaggacgtcgttggagagacctatctgggaattcaaattttcaggttctattttaagtgc
acaaaatgctcagccgaaataactttcaagacagatcctcagaattctgattatgttgtt
gagtctggtgcgacgaggaattttgagccttggcgtgcagaggatgaggaattggaagaa
gagcaaaagaaaaggaatgctgaagaaatgggagatgccatgaaatcactggagaataga
actttagactcaaagagggaaatggatatccttgccgctttggatgaaatgaaatctatg
aagtcaagacatgcaactgtgagtgtagatgcaatgctcgaagctctgcaacactcaaac
gagcagaagaaaaggaagctggaagaagaagatgaagctcttataaaatcagtgtttaag
ggacaaagagaggctgctgttgtgcgaagaattgacgatgacgatattgatgatgaggag
gatttaaattacttttcacctgacaatgggggaacatcaactggtccatcaaaaagaaag
gtccctgaagagcatccttctaacccaacagatgctttgacaacagccggtgttggtgac
agctccaacaatcaagataatgctggtgctagtggggcttcaaataatggtaaattcatt
ttcaaatcctcttcagtcagagtttctatcgtcaagaaatcagctgcagattcaaatggg
aacatgccaagcaaggagtctgaaaagcaggatgcaaattctacagctgtgactaatagt
ggattgctatcgttatgccaacagtatggaagtgatgaagatgaatga
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