Sesamum indicum (sesame): 105176886
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Entry
105176886 CDS
T04135
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105176886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105176886
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105176886
U7-dependent histone pre-mRNA processing factors
105176886
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_10
partial_CstF
Motif
Other DBs
NCBI-GeneID:
105176886
NCBI-ProteinID:
XP_011098130
UniProt:
A0A6I9UAY5
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Position
LG14:3574289..3580105
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AA seq
531 aa
AA seq
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MAANSQSQHRCVFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKD
EETALSARRNLQGYEINGRQLRVDFAENDKNADRNREQGRGGPGVFPNADASRQFGGQAL
LGHPSLHQPIGDSVAMAAATVMAGALGSAQTASTSGQIGLQRQSLLGTDPLTRHLAKMSR
SQLMEIVSEIKTVATQNKEQARQLLLAIPTLPKALFQAQIMLGMVPQQMLQQMPNIRQAS
TQPVQSLVQSAQNLPGLPPLPQNKMQLGVLPYAHESRVSTGVPKQYAAVQQIPTQSQIQR
PQLMQNQVLQQGQLLAQSGVSSLPSIHHQSFGGLSVGPQTPQSSSSFDQMQHPLSQNVGS
VPPTNPGYNYQPMSQNTGTHPSVLVRPQFSAAGFQPSSSTSPAVLEDMDLKVHSLSLPGK
TRMVSNSTDLVDRASKMVKLNEGRATPSSQAVNIATLSAPFPTSNIPGRQAPRVDETRNS
EKQASQMQLPPDVDSTLLQQVLNLTPEQLSSLPPDQQQQVIQLQQMLRQAT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaattctcaatcccagcatcgatgcgtttttgttgggaatataccttatgat
gctactgaagagcagcttattcaaatatgtgaggaggtcggccctgttgtttccttcaga
ttagttattgatagagaaactgggaaaccaaagggttatgggttctgtgagtacaaggat
gaagagacagctctaagtgctcgtcgtaatcttcagggctatgagataaatggacggcag
ctgagagttgactttgctgagaatgacaagaatgctgacaggaaccgtgaacaggggcgt
ggtggccctggtgtttttccaaatgctgatgcttcaagacaatttgggggtcaagcactc
cttggacatcccagtcttcaccagccaataggtgattcagttgctatggcagctgcaact
gtcatggctggagcacttggatctgctcagactgctagcacatcaggtcagataggattg
caaaggcaatccttgttgggcactgatcctctgactcgtcatttggccaaaatgtcaagg
agtcagctgatggaaattgtgtctgaaatcaagacagtggctacacaaaataaagaacaa
gctcgacagctcttactagccatcccaaccttgccaaaagctctttttcaggcccagatt
atgctagggatggtgccccaacaaatgttgcagcagatgccaaatattcggcaagcttct
acacaaccagtgcagtcattggtgcaaagtgctcaaaatcttcctggcctgcctccactt
ccacagaacaaaatgcaactgggtgtgctcccttatgcacatgaaagtcgagtttccact
ggtgtaccaaaacaatatgctgcagttcagcaaattcctacacaatctcaaattcaacgt
ccacaactaatgcaaaaccaagtcctacagcaaggtcaactacttgcgcaatctggagtc
tcatctcttccctctattcaccaccaatcatttggtggtctgtcagttggaccacaaacc
ccacaatcttcctcttcttttgaccaaatgcaacatcctttgtcacaaaatgtaggctca
gttccacctactaatccaggttataattatcagccaatgtctcagaacaccggcacacat
ccttctgtgcttgtacgcccacaattttcagctgcaggctttcagcctagctcctcaaca
tcccctgctgttctggaggatatggatctgaaagtgcattcattaagtctccctggaaaa
acaagaatggttagcaacagcacggacctagtggacagagcgtcaaaaatggtgaaattg
aatgagggaagggctaccccttcttcacaggctgtaaatatagccactctgtctgcacca
ttcccaacttcaaacattccaggaagacaagctcccagagtagacgaaactcgaaactct
gagaaacaagcttctcagatgcaacttccgccagatgtagattctacactgcttcagcaa
gtgctgaatctgacaccagagcagctaagttccctgccaccggaccagcagcagcaagtg
attcaacttcagcagatgctccggcaggcaacctag
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