Sesamum indicum (sesame): 105177150
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Entry
105177150 CDS
T04135
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105177150
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
105177150
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Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
CILP_5th
Motif
Other DBs
NCBI-GeneID:
105177150
NCBI-ProteinID:
XP_011098501
UniProt:
A0A6I9UIC3
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Position
LG2:complement(2134528..2152475)
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AA seq
644 aa
AA seq
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MVIECLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSLISKSHDFTRSL
SCIIITHFHLDHIGALPYFTQVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEEQF
SSEHIVECMKKVTAVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAIVYTGDYNM
TPDRHLGAAQIDRLQLDLVITESTYATTYRDSKYVREREFLKAVHKCVASGGKVLIPTFA
LGRAQELCMLLDDYWERMNLKVPIYFSAGLTIQANMYYKVLINWTSQKVKDTYATRNAFD
FKNVLSFDRSLINAPGACVLFATPGMISGGFSLEVFKQWAPCEKNLVTLPGYCVAGTVGH
KLMSAKIPTQIRLDEDVQINVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPK
MVTLKEKIQSELGIQCYLPANSESLCIPTTHHIKAGASDAFVRSCLSPNFKFLKTNSAEL
DDSHKRTMPLLQVYDDRVSEGILTLQKNQSPKVVNQNEFMEALGVEKHEVKLAHCFRVYI
PDSESGDASDCLPSTSRKGSLLHLISEKLCRELPDFDVQDCQEHIQIQSVVVSFCSNEKC
PHRTGVSLQSVDKKEVHFCCSWSVADDALAWRIVASIKNLELDT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggttatcgaatgtctagtcttgggcgcggggcaagaggtggggaagagctgcgtggtt
gtgacgataaatgggaagagaataatgtttgactgcggaatgcacatgggctatcttgac
caccgcagataccctgacttttctttgatttctaagtctcatgactttacccgttccctc
tcgtgtataatcatcacacacttccacctggaccacattggagcacttccatattttact
caagtttgtggctacaatggccccatttacatgacgtatccaacaaaagccttggctccg
ctgatgcttgaggattaccgaaaagtgatggttgacagaagaggggaggaagagcagttt
agttcggagcatatcgttgaatgtatgaagaaagtcactgcagtggatctgaagcagact
atacaggttgatgaagacctccagatccgtgcatactatgcagggcatgttctgggggct
gcaatgttttatgccaaagttggagatgctgccatagtgtatacaggggattacaatatg
acacctgatagacatcttggagcagctcaaattgatcgactgcagctggatctcgttata
acggagtcaacctatgctacaacataccgtgattcaaaatatgttcgagagagggaattt
ctgaaagcagttcacaaatgtgttgctagtggagggaaggttctgattcctacatttgct
ttggggagggctcaggaactctgtatgctgttagatgactattgggagaggatgaatctt
aaagttcctatatatttctcagcaggtttgaccatacaagcaaatatgtattataaagtt
ctcatcaactggaccagccaaaaggtcaaagatacttatgccacacgtaatgcatttgac
ttcaaaaatgtcctcagttttgatcgttccttgataaacgctcctggagcttgcgttctt
tttgctactccaggaatgattagtggtggtttctcacttgaagtttttaagcagtgggct
ccatgtgaaaagaatcttgtcacactgccaggatactgtgtggctggaactgtaggacac
aaactgatgtcggccaagataccaacccaaattaggctcgatgaagatgtccaaattaat
gtgcgatgccagattcatcagttatctttcagtccccatactgatgccaaaggaatcatg
gatctcgtgaagttcctatcccctaagcatgttattcttgtacatggtgaaaagcctaaa
atggttacactcaaagaaaaaattcagtccgaactgggaattcaatgttatcttcctgcc
aatagtgaatctttgtgcatcccgacaactcatcacataaaagctggtgcctctgatgca
tttgtccggagctgtttgagcccaaacttcaagtttttgaaaactaactcagctgaattg
gatgattcccacaagagaacaatgcctctgttgcaggtttatgatgacagagtatctgaa
gggatactaaccctgcagaagaaccagagcccaaaagttgtgaatcaaaatgaatttatg
gaagcgttaggagtagaaaaacacgaagtgaagcttgctcattgtttccgagtatatatt
cccgattcagaaagtggagatgcatcagattgtttgccttcgacgtcccgcaaaggctca
ttgctgcacttgatatctgaaaaactttgcagagaactccccgattttgatgttcaggac
tgccaagaacatattcagattcagtcggtcgttgtctctttttgttcaaatgaaaaatgc
cctcacagaactggtgttagtttgcagagtgtagataaaaaggaggttcatttttgctgc
agctggtcagtagcagatgacgcgcttgcttggagaattgttgcaagcataaagaatttg
gagttggacacttaa
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