Sesamum indicum (sesame): 105177213
Help
Entry
105177213 CDS
T04135
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105177213
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105177213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105177213
NCBI-ProteinID:
XP_011098575
UniProt:
A0A6I9UUG5
LinkDB
All DBs
Position
LG15:736559..738575
Genome browser
AA seq
449 aa
AA seq
DB search
MNTAHICLSVLFLFAFASTLPGAVRAHIAEFDEVWQRRAEEAWNRTLESYEPAPAKIVSH
LNLNVHRALKEVKEEELSLNSTRRQLSHGYDGPCRVTNPIDRCWRCQANWAQNRFRLADC
VLGFGYKAKGGKNGKIYVVTDPSDNDMVNPKPGTLRHAVIQKEPLWIIFQRDMLIRLSQE
LIVQSDKTIDGRGARVLIANGAGITLQFVKNVIIHGIKIYNISPGQGGMIRDAVDHYGLR
TRSDGDGISIFGSQDIWIDHVSMLNCADGLIDVIMGSTGVTVSNSHFTDHNEAMLFGASD
SHTQDVKMQVTVAFNHFGKRMVQRMPRARYGYIHVVNNDYTHWNMYAVGGSKNPIIISQG
NRYIAPPTNPYAKEVTKREYSPESVWKSWVWRSEGDIFQGGAFFVQSGDPTYTSKHPEKY
DLIQAAPAQNVAEITKFAGALGCKVGVPC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagctcatatatgtttgtcggttctcttcttgtttgcatttgcttctactctt
cccggtgctgtccgagcacacattgcagaattcgacgaggtatggcagaggcgagcagag
gaggcctggaaccgaacactcgaatcctacgagccagctcctgccaagatagttagtcac
ctcaatctcaatgttcacagggccttgaaggaagtaaaagaagaggaattgagcttgaat
agtacgaggaggcagctaagccatgggtacgacggcccatgcagggtcacgaatccaatc
gacaggtgctggagatgccaggccaattgggctcaaaacaggtttaggctggcggactgc
gtgttgggcttcggctacaaggccaagggaggaaagaacggtaaaatctacgttgtcacc
gacccatcagacaatgatatggtcaatccaaagccaggaaccctccgccatgcagtgata
caaaaggagccattgtggatcatattccaacgtgacatgctcatcagactctcgcaagaa
ttgatcgtccagagtgacaagaccatcgacgggcgtggtgcgagagtccttattgcaaat
ggcgcaggcattaccctccaatttgtgaagaatgtgatcatccatggcattaagatttat
aacattagtccagggcaaggtggtatgatcagggatgctgtagaccactatgggctcagg
accaggagtgatggggatgggatatcgatcttcggttctcaggatatctggattgatcac
gtctctatgctgaactgcgcagatggtctcattgacgttatcatgggatcgactggagtc
accgtctcaaatagccacttcacagatcacaatgaggcgatgctttttggtgcgagcgat
agccacacacaggacgtaaaaatgcaagtcacagttgctttcaaccactttgggaagagg
atggtgcagagaatgccaagggcacgatacggctacatccacgttgttaacaatgactac
actcactggaatatgtatgcagttggtgggagcaagaaccccattattattagccaaggg
aatagatacattgctcctccaactaatccttatgccaaggaggtgacaaagagggagtac
tcgccagaatcggtatggaagtcgtgggtgtggagatcagagggagatatattccaagga
ggtgcattctttgttcaatcaggtgatccaacatacactagcaagcatcctgagaagtat
gacctgattcaggccgccccggctcagaatgttgctgagatcacaaaatttgcgggcgca
cttggctgcaaagtaggagtaccgtgttag
DBGET
integrated database retrieval system
