Sesamum indicum (sesame): 105177296
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Entry
105177296 CDS
T04135
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04120
Ubiquitin mediated proteolysis
sind04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105177296
04120 Ubiquitin mediated proteolysis
105177296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105177296
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105177296
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
U-box type E3
105177296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF5770
Motif
Other DBs
NCBI-GeneID:
105177296
NCBI-ProteinID:
XP_011098694
UniProt:
A0A6I9UCE2
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All DBs
Position
LG15:complement(1200580..1206523)
Genome browser
AA seq
1037 aa
AA seq
DB search
MSTQRAPRTPAEIEDIILRKIFLVSLVDSMESDSRIVYLEMSAAEILSEGKELKLSRELM
ERIIIDRLSGNFPAAEPPFQYLLNSYRRAYEEGKKIASMKDKNVRSEMEGVVKQAKKLAV
SYCRIHLGNPDMFPNNDTSKSNVSPLLPLIFAEVGGNLDGFGGSSGGISCPPGFLEEFFR
DADYDSMEPILKQLYEDLRGSVLKVSALGNFQQPLRALLLMVNYPVGAKALVNHPWWIPK
GVYLNGRVIEMTSILGPFFHVSALPDHAIFKSEPDIGQQCFSEASTRRPADLLSSFTTIK
TVMNNLYDGLAEVLMCLLKNTNTRENVLEYLAEVINRNASRAHLQADPLSCASSGMFVNL
SAVMLRLCEPFLDANLTKRDKIDPKYVFYSSRLELRGLTALHATSDEVSEWFNNNTAKVD
ISTNNSDGQSRLLQSQEATSSGSNANEPSLLQNNSSVSRSSEKAKYPFICECFFMTARVL
NLGLLKAFSDFKHLVQDISRCEDALSSFKAMQEQAPSAQLQQDITRLEKEIELYSQEKLC
YEAQILRDGGILQRALSYYRLMVVWLVGLVGGFKMPLPPTCPKEFASMPEHFVEDTMELL
IFASRIPRALDGVMLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSKATET
LFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNVWR
KIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPAQERQER
TRLFHSQENIIRIDMKLANEDVSLLAFTSEQITAPFLLAEMVERVASMLNYFLLQLVGPQ
RKSLSLKDPEKYEFRPKLLLKQIVNIYVNLARGDKDKIFPIAITKDGRSYNEQLFGAAAD
VLRRIGEDGRIIQEFVDLGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMRDPVILPS
SKVIVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDVELKARIEEFIKSQELKRRGEGLSM
QSTKATIQTTDTTTLID
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcagagagccccaagaacgccggcggaaatcgaggatattatcctcaggaag
atatttcttgtatcgctcgtcgattccatggagagcgattcgcgaatagtctatctggag
atgtccgcagccgagattttgagcgagggtaaggagctgaagttatcgcgagaactaatg
gagagaatcataattgatagactgtccggcaacttccccgccgccgagcccccgtttcag
tacttactcaattcttatcgccgcgcatatgaggaagggaagaaaatcgcatcgatgaag
gataaaaacgtgagatcagagatggaaggtgtagtgaaacaagccaagaaattagcagtt
tcgtactgtaggattcacttagggaatcctgatatgttccctaataatgacacgagcaaa
tcgaatgtttctccattactgccgttaatttttgctgaggttgggggtaatcttgatggg
tttggagggagtagtggtgggatttcgtgcccccctggttttcttgaggaattctttagg
gatgctgattatgattcaatggagcctattttgaagcagttgtatgaggatttgagaggt
agtgttttgaaggtttcggctctggggaatttccaacagccactaagggcgttgttgttg
atggtaaactatccagtgggggcaaaggcattggtaaatcatccatggtggattccaaaa
ggtgtgtatttgaatggtagagtgattgagatgaccagtatattgggacccttttttcat
gttagtgcattgcctgatcatgctatattcaagagtgaacctgatattggccaacagtgc
ttctctgaagcatcaacacgccgcccagcagatcttttatcatcctttacaactatcaaa
actgttatgaacaacttatatgatgggttggcagaagttcttatgtgccttcttaagaat
acaaatacccgtgaaaatgttcttgagtaccttgcagaagtcatcaacagaaatgcttca
agggcacatttacaagccgatccgttatcttgtgctagttccggcatgtttgtaaatctc
agtgccgtaatgcttcgtctctgcgagccatttttagatgccaatttgacaaaaagggac
aaaattgatcctaaatatgtattttacagtagccgcctggaactgagaggactgactgct
ctacatgcaacatctgatgaagtatctgaatggtttaacaataatactgcgaaggttgat
atctcaacaaataatagcgatggacaaagccgattgctacaatctcaagaagctacaagt
tctggcagtaatgctaatgaaccttctctcctccaaaataatagttcagtctccagaagt
agtgaaaaagccaaatatccattcatatgtgaatgcttcttcatgactgctagggtgctt
aacttggggttgctaaaagcgttttcggacttcaaacatcttgttcaggatatttctaga
tgtgaagatgctttatcctcttttaaagccatgcaagagcaagcgccttctgcacaattg
cagcaagatataacccgcctggagaaagaaattgagttgtactcacaggagaagttatgc
tatgaagcgcaaatactaagggatggaggaattcttcagcgcgcattgtcttactaccgc
ttaatggtagtttggttggtcggcttagtaggtggatttaaaatgcctctaccaccaaca
tgcccaaaggaatttgcttctatgccggagcactttgtggaagacaccatggagttgcta
atttttgcctcacggattcctagagctttagacggggttatgctggacgattttatgaac
ttcatcattatgttcatggccagcccggagtacatcagaaatccatatctcagagccaaa
atggttgaggtccttaattgttggatgcctcggagaagtggctcaaaggcaaccgaaact
ttgtttgaagggcatcagttgtcccttgagtatctagtgaggaatcttctgaagctctat
gttgatattgaattcacgggttcccacacacagttctatgacaagtttaacatccgtcac
aacattgccgaactccttgagtacttatggcaggttcctagtcatcgtaatgtctggaga
aagatagctaaggaggaagagaagggcgtctatctgaactttttgaactttttgattaat
gatagcatttacctattggatgaaagtctaaacaaaattcttgaactgaaagaactggaa
gctgagatgtctaatactgtggaatgggagaggagacctgcccaggagaggcaggagaga
actcgactctttcactctcaggagaatattattaggattgatatgaaattggcgaatgaa
gatgtgagcttgctggcatttacttcggagcagataacagccccttttctgctggcggag
atggttgaaagagttgctagcatgctgaattattttttgttacaactcgtggggccccaa
agaaaatctcttagcttgaaagaccctgaaaagtacgagtttcgacccaaattgttacta
aagcagattgttaatatatatgtcaacctggcccgaggagacaaggataaaattttccca
atagccatcacaaaggatggtcgttcatacaatgagcagctctttggtgctgcagctgat
gtgttgaggagaattggggaagatggtaggataatacaagagtttgttgaccttggagca
aaagccaaagttgctgcttctgaagcaatggatgcagaggctgctcttggagacatacca
gatgagttccttgaccctattcagtacactttaatgagggatcctgtcattctgccatca
tccaaggtcatcgtagacagaccagttattcagaggcatctcttaagtgacagcacagat
ccatttaaccggtctcatctgacggcggacatgttaatacccgatgtggagttgaaggca
agaattgaagaatttattaagtcccaagagctgaaaaggcgtggagaaggcttgagcatg
caaagcaccaaagccaccatacagactactgatacaactaccttaattgattag
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