Sesamum indicum (sesame): 105177336
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Entry
105177336 CDS
T04135
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105177336
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105177336
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
105177336
NCBI-ProteinID:
XP_011098761
UniProt:
A0A6I9UIU5
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Position
LG15:199980..202277
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AA seq
465 aa
AA seq
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MKNMVKFLVHVTFLAWLSSNRLFCISSAKIHKHRKVGKSNISAYPGGGMSENNDADSSTT
FNVLNYGAKGDGIADDTNAFEAAWTDACQEQGSVMLVPSGSVFLVKPISFSGPNCMSNIV
FQLDGKIIAPRSSGAWGSGLLQWLEFTKLKGITIRGKGSIDGQGSVWWDDYSTANPTDES
DAAGSPDWASAEAKGGMPSTRPTALRFYGSTDVTVTGITIQNSPQTHLKFDDCIGVQVFG
ISISSPGDSPNTDGIHLQNSQDVVIHTTSLACGDDCISIQTGCSGVYVHNVNCGPGHGIS
IGGLGKDGTKACVSNITVRDSTIQNTLNGVRIKTWQGGSGSVQGVMFSNIQVSEVETPII
IDQFYCNGHTCPNKTSAVAVSGVSYQSIKGTYTVNPVSFACSDSTPCAGITLSSIVLNPS
SEAKNDNPFCWKAYGELQTATTPPIDCLQTGGASHKQPNNNGGSC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatggttaaatttctagtacatgttacatttcttgcctggctttcatcgaac
cgtttgttttgcattagtagtgcgaaaatccacaagcacaggaaggtaggaaaatccaat
attagtgcatatcctggtggtggaatgtcggaaaacaacgatgcagatagttccaccacc
tttaatgtattgaactatggtgctaaaggcgatggcattgccgacgacacaaatgcgttt
gaggcagcatggactgatgcgtgccaagaacaaggatcagtgatgttggtcccgtcagga
tcggtattcctcgtcaaacctatctccttttcaggccccaattgcatgtccaacattgtt
ttccagttggatggtaaaataatcgctccaaggagttcgggagcgtggggatcagggctc
ttacaatggctggaattcacgaaactgaaaggaataacaatcagaggtaagggaagtatc
gacggtcaagggtctgtctggtgggatgactactcgacagcaaatccaaccgacgaatca
gacgcagcaggttctccagattgggcaagcgctgaggctaaaggaggaatgccaagcacc
aggccaacagcacttagattttacggaagtaccgatgttacagtgacggggataacaatt
caaaacagcccacaaacacacttaaaattcgacgattgtattggggttcaggtcttcggt
ataagcatctcgtcccctggagacagtcccaacacagacggaatccacctccaaaactcc
caggatgtcgtcatccataccacctctcttgcctgtggagatgattgcatttcaatacaa
acagggtgctcaggggtatacgttcacaatgtgaactgcggacctgggcacggtataagc
atcggtggactagggaaggatggtactaaagcttgtgtctccaatattaccgttcgcgac
tctacgatacaaaatacgttgaatggtgtaagaataaagacttggcagggcgggtcagga
tcagtgcaaggagtgatgttttccaacattcaagtttctgaagtagaaactcctataatt
atcgaccaattctattgcaacgggcacacatgccctaacaagacatcggctgtagccgtt
tctggtgtttcctatcagtccataaagggaacttacacggttaatcctgtgagttttgca
tgcagcgactccacaccgtgtgccgggataacgctatcaagcatagtactgaacccatca
tcagaggcgaagaatgataatcccttctgttggaaggcctatggggagctgcaaacagcc
accactcctcctattgattgtttgcaaacaggaggtgcttcccataaacaaccaaataac
aatgggggttcatgctga
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