Sesamum indicum (sesame): 105177423
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Entry
105177423 CDS
T04135
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105177423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105177423
03036 Chromosome and associated proteins [BR:
sind03036
]
105177423
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105177423
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105177423
PBAF complex
105177423
GBAF(ncBAF) complex
105177423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
105177423
NCBI-ProteinID:
XP_011098877
UniProt:
A0A6I9ULA7
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Position
LG15:1733777..1736874
Genome browser
AA seq
538 aa
AA seq
DB search
MSANNNNPQKNIGASSPFGNSLPVNPSAQQQLGSGFPGQLQLSEAQMQALAQAQSKAEAQ
AQAHARARMFAAHAQIQAQWQAAQGLPFNQGHSGGIANLGSQSPSVSGAGSASAKRFPQK
PPVHPPSFSPSTTASPLRTMDASAAARRKKQKLPEKQLQERVAAILPESALYTQLLEFES
RVDAALTRKKIDIQEALKTPTYIQKTLRIYVFNTFANQIRTIPKKPNAEPPTWTLRIVGR
ILEEGVDPDQAAMMQNPSSSYPKFSSFFKRVTITLDQKLYPDNHLIIWDSARSPAPHEGF
EVKRKGEQEFTASIRLEMNYMPEKYKLSAALTELLGIEVDTRPRIIAAVWHYVKARKLQC
PDDPSSFNCDLPLQKVFGEGKIKFTAVTQKITPHLFPPQPIHLEHRIKLSGNSPVGTACY
DVLVDVPFPIQRELNALLANTEKTKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPIE
FINALIDSQNKDLKLVSGEASRNAEKERHSDFFNQPWVEDAVIRYLNRKLPGDAPGNT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaataacaacaaccctcaaaagaatattggggcttcatcccctttcggaaat
tctttgcccgtgaatccatctgcgcagcaacaactgggatctggatttccgggacagctt
cagctttctgaagctcagatgcaggccctcgcccaggctcaatcaaaggctgaggctcag
gctcaagctcacgcccgagctcgaatgtttgcagcccatgcacaaattcaagcccagtgg
caagctgctcagggccttccattcaatcagggtcattctgggggcattgcgaatttgggt
tcacaatctccctctgtttcaggtgctggaagtgccagtgccaaaaggtttccacaaaaa
ccacctgtacatccgccaagcttctcaccttccaccacagcctctccattgaggacaatg
gacgcatcagctgctgctcggaggaaaaagcagaaacttcctgagaaacagttgcaggaa
agagttgcagctattttgcctgagtctgctctctatactcagcttcttgagttcgagtct
cgagtggatgctgctttgacaaggaagaaaattgatatccaggaggctctaaagacacca
acctatatacaaaaaacgctccgcatttatgtttttaacacttttgcgaatcagatacgc
accattcctaagaaaccaaatgcggagccgcctacatggactcttagaattgtagggagg
atcttggaggagggagtggatcctgaccaggctgccatgatgcagaatccgagctcttca
tatccaaagttctcttcatttttcaagagagtcacaatcactctggaccagaaattatat
cctgataaccatttgattatatgggatagtgctagatcacctgctcctcatgaaggcttt
gaggtcaaaaggaaaggggaacaagaatttactgctagcataagattagaaatgaactat
atgcctgagaaatataagctttctgcagctttaacggagcttttaggcattgaggttgat
actcgaccaagaatcattgcggcagtatggcattatgtcaaggctcgaaagttgcagtgt
ccagatgacccatcttctttcaactgtgatctaccgcttcaaaaagtatttggggaaggc
aagatcaagttcacagcagttacacaaaaaattacaccccacctctttcctcctcagccc
atacatttagaacacaggatcaaactctcaggaaatagtcctgttggaactgcatgctat
gatgtattagttgatgtacccttccctatacagagggaattgaatgctttgttggccaat
actgaaaagaccaaagagattgatgcctgtgatgaagcaatttgtgcagcaataagaaag
atccacgagcaccggcggagaagggcattctttcttggatttagtcagtcacccatagag
tttatcaatgccctgatagattctcaaaataaggatctgaagcttgtttctggggaagca
agtcgcaatgcagaaaaagaacgccattcagatttcttcaaccaaccctgggttgaagat
gctgttattcgctaccttaaccgaaagctgcccggagatgcccctggcaacacatga
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