Sesamum indicum (sesame): 105177591
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Entry
105177591 CDS
T04135
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105177591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105177591
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
RNases
105177591
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Fib_alpha
HIP1_clath_bdg
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
105177591
NCBI-ProteinID:
XP_011099099
UniProt:
A0A6I9UG05
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Position
LG15:2661941..2665816
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AA seq
491 aa
AA seq
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MDELIASAKKEVLVEMVKLAQKRGMAGSKGHWKEFLKVYDKKFGASLSDPSRRSVDSLAA
FLKTFTQDDDQKFFKKVIQCHRNREDVEQFKKTSPDNETAEQKLVRLTLEHPQYPIDYSF
PSHEEVRISKFLPKKSKALKSVDMIAIDCEMVLCEDGTEALVKVCAVDRNLQVKLDEVVN
PDKAIADYRTEITGISAKDLDGVTHSLKDVQKLLKKLLSNGTILVGHSLNNDLQALKLDH
TRVVDTSYVFKYANGPTNKKPSLSLLCKAMLGYELRQKGNPHNCLDDACAAMKLVLARLE
GRIDDVVTEEVKELDIAKLLVHRIPITLHSKDLNSILPGEFTVEVKANKKVRDTYSAFAI
FKNKQEAIEAFENLEGDLEKDSCGRPQKLVKFMLDSGTSGTLCVCKIVPEFSVGQLAKKR
SVEDDNNTAGVLKKLRTDQTSGQLEDSSHCRHQCETHLQEIERLKGELSKRDQEISNLNK
IIAALARKQGL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggacgaattgatcgcgtctgcgaaaaaggaggtgttagttgaaatggtgaaattggcg
caaaagagaggaatggctgggagtaaaggtcactggaaggagtttctgaaagtttatgat
aagaagtttggggcaagcttgagtgacccgtccaggaggtctgttgattcattggctgca
tttttgaaaacattcacgcaagatgatgatcagaagtttttcaagaaagtaattcaatgt
catcgcaaccgtgaagatgtggagcaatttaagaaaacatcccctgataatgaaactgct
gaacagaagctagtccgtttgactttagagcatcctcagtaccctattgattattccttc
ccttcacatgaggaggtacgtatatcaaaatttcttcctaaaaagtcaaaagccctgaag
tctgtggacatgattgccattgactgtgagatggtcctctgtgaagatggcactgaagct
ttggtgaaggtgtgtgctgtagaccgcaatttacaggttaaacttgatgaagtagtaaac
ccagataaagcaattgcagattatcggacagagataactggaatctcagcaaaagattta
gatggagtgactcattctttgaaagatgtgcagaaattgctgaagaagttattgtccaat
ggtaccattttagttggtcacagtctcaataatgatcttcaagcattgaagttagaccac
acaagagttgttgacacatcttatgtcttcaagtatgcaaatggaccgaccaacaagaaa
ccttctctgagtttgttgtgtaaggcaatgttaggttatgagctccggcaaaagggaaat
ccgcacaactgtctagatgatgcatgtgctgcaatgaagcttgtcttagccagattagag
ggaagaattgatgatgttgtaaccgaggaggtgaaggagttagatatagcaaaattgctg
gtgcataggatccccattactcttcatagcaaagatttgaatagtattcttcctggggaa
tttactgttgaagttaaggcgaataaaaaagttagagatacatattcggcctttgcaata
ttcaaaaataagcaagaagcaattgaagcgtttgagaatctcgagggtgacttagaaaag
gactcgtgtggtcgaccacaaaagcttgtcaagtttatgcttgattcaggaacatctggt
actttgtgtgtttgtaagattgtaccggagttttctgttggccagttagcaaagaagagg
tcagttgaagatgacaataacactgctggtgtattgaagaagttgagaacagaccagaca
tcaggacaacttgaggactccagtcactgcaggcatcagtgtgagacacatttgcaagag
attgagagattgaagggagaactaagtaaaagagatcaggaaatatcaaacttgaataaa
ataattgctgctcttgctcggaaacaaggactctga
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