Sesamum indicum (sesame): 105177607
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Entry
105177607 CDS
T04135
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sind03016
]
105177607
Transfer RNA biogenesis [BR:
sind03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
105177607
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
TPR_IFT80_172
WD40_CDC20-Fz
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
105177607
NCBI-ProteinID:
XP_011099121
UniProt:
A0A6I9UJI5
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Position
LG15:2788278..2794047
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AA seq
1320 aa
AA seq
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MNNLKLSWEVWSEVQLQRENGEEFLRFSAVDMERNRLFFASSANFVYATQLPSPQIDGAW
NKTLPPASAHPIDLETGDFITSLEYLMEKESLIIGTSQGLLLLYSVEDNTTEIVGRVEGG
VWCISPSPDGDLLAMITGFGQVLVMNLDWDLLYEMPLDDLPEDADVHESVPSADHSFEAS
ISWRGDGKFFASLSKVHDSFPMRKKLKVWERDSGALHSVSEPKPFMGSIVDWTQSGAKIA
VVYDQKEKKQCPSVVLFEKNGLERSSFSINEGMDVTLEFLKFNCNSDLLAAVVRGETFDT
LKIWYFSNNHWYLKQEIRYSKEDGIRFMWDPTRPLKLICWTLGGRIITHKFVWVTAVTDN
SIAFVIDGSKILVTPFSLSLIPPPLFFFDLEFHCAVRDMAFCSKISQNQLAVSLSDGSLC
IVELPLLDQWDELEGQTFKVEALYPGRDHGSLLHLAWLNSHVLLSVSHFSFAHSNCSKGT
SLDGDVRSGYYLQETEIRCSEDRIPGSVTCSGWHAEIFHQLYLEGVVIGIAPNPLTKYSA
FLQFDGGKIFEYMSKLALNKVVDLQRCDDMFFLSSCPWMNVAPVRAYAKEKPLLFGLDDN
GRLQLGGRILCNNCNSFSFYSNSGEGMMTHLVIATKQDLLFIVDMGDILHEQLEQYENFL
PVVVKNKKGDTESIFINLWEKGAQIIGVLHGDESAIILQTPRGNLECVYPRKLVLTSIVN
ALVQGRFRDALLMVRRHRIDFNVIVDHCGWQAFIESAADFVRQVNNLSYITEFVCAMKHE
DIMETLYKNYTSLPCIKGNKNIRQREPKSTNGDNKVYSVLLAIRKALQEQIEETPARELC
ILTTLAKSSPPALEEALRRIKVIRETELSTAADPQASYPSSEESLKHLLWLCDSEAVFEA
ALGLYDLNLAAIVALNSQRDPKEFLPLLQELERMPTLLMQYNIDLKLQRYESALRHIVSA
GDPYYEDCMNLMNKVPELYPLGLQLIVDPRKRQQVLEAWGDHLNATKCFEDAATTYLCCF
CLEKALKAYRACGNWMGVLTVAGLINLGKDDLLQLARELSEELQALGKPGDAAKILLEYC
GDVDNAISLLVDARDWEEALRIAFLHRREDLVLAVKNASLECSSMLNGEYNEGVEKVGKY
LTRYLAVRQRRLLLAAALKSDEQPHLDDETASQASSNFSGMSAYTTGTRKGSSASTSFST
STKGRGRQRNRGKIRAGSPDEEMALVEHLKGMSLTEGAKSELKTLLISLVMLREEDAARK
LQRTAEKFQLSQMAAVKLAEDAMTTDKIDEHAFTLDRYVENLGKEVQNSDAFSWQSKVLA
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgaagttgtcctgggaggtatggtcggaggttcagctgcagagggagaat
ggagaagaatttctccggttttctgctgtggacatggagcgcaaccgcctcttctttgct
tcctccgccaacttcgtgtacgccacgcaactaccttcgcctcaaattgacggagcatgg
aataagaccttgccgcctgcttcagctcacccgattgatttggaaactggagattttatt
acttctttggaatatctcatggaaaaggaatccttaatcatcggaacttcgcaaggactt
ctcttactttattcagtggaggataatacaacagagattgttggtcgggtcgaaggtggt
gtctggtgcatttcaccaagtcctgatggagatctacttgctatgatcactggttttggt
caggttctagttatgaatcttgattgggatctattatacgagatgccacttgatgatttg
cctgaagatgctgacgtacatgaatcagtgccatctgctgatcattcctttgaggcttcc
atttcatggagaggtgatgggaaattttttgcgtcattgagcaaggtgcatgattccttt
cccatgcgtaagaagcttaaagtttgggaacgtgattcaggggctctccactctgtctca
gaaccgaagcctttcatgggatcaatagtggactggacccagagtggagcaaaaattgct
gttgtctatgatcaaaaggaaaaaaagcaatgtccatctgtagttttatttgagaagaat
ggtctagagagaagctcattcagtatcaatgagggaatggatgtgaccttagaatttcta
aagttcaactgtaactcggatcttcttgctgctgttgtcagaggcgaaacgtttgacacc
ctcaagatatggtactttagtaataaccactggtacttaaagcaagagatcagatattcg
aaggaggatggcataagatttatgtgggatcccactagaccattaaagttgatttgttgg
actcttggtggccgaattataactcacaagtttgtctgggttacagctgtaacggacaac
tcaatagcatttgtcatcgatggctcaaagatattggtaacccccttttctttgtccttg
atcccccctcctctgttcttttttgacttagaatttcattgtgcggttcgggatatggcc
ttttgttctaaaatttcccaaaatcaactggctgtatctctgtcagatggaagtttgtgt
attgtggagcttcctctgcttgatcagtgggatgagctggaaggccagacatttaaagtt
gaggctttgtatcctggtagagaccatgggtctttgctacatcttgcttggttaaattca
catgtgcttcttagtgtgtctcatttcagttttgctcatagtaattgcagtaagggaaca
tcccttgatggggatgtgcgttcaggatattacctgcaggaaactgagataagatgttct
gaagatcggattcctggttcagtgacatgctcaggatggcatgcagaaatttttcatcag
ctttatcttgaaggggtggtaattggtattgcacctaacccgcttactaagtattctgca
tttcttcagtttgatggtggaaaaatattcgagtatatgtcaaagttggctttgaacaag
gttgttgaccttcagagatgtgatgacatgtttttcctatcatcctgcccatggatgaat
gttgccccagttagagcctatgcgaaagaaaagccgttgctttttgggcttgacgacaat
ggaagactacaacttgggggaaggatattgtgtaacaactgcaatagtttttctttttat
tcaaactctggtgaggggatgatgacgcatttggtgattgcaactaaacaggatttactg
tttattgttgatatgggtgatattttgcacgagcaactggaacagtatgagaatttcctt
cctgttgttgtcaagaataagaagggagacactgaaagtatttttattaatctatgggaa
aagggggcccagataattggagttctccatggagatgagtctgctatcatactacaaaca
cctcgaggtaatctagaatgtgtgtatcccaggaaattagtgctcacttcaatcgtcaat
gctctggttcaagggcggtttagagatgccttgctgatggtaaggaggcataggattgat
ttcaatgtcattgttgaccattgtggttggcaagcctttatcgaatcagctgcggacttt
gtcagacaggttaacaatctgagctacatcactgagtttgtttgtgccatgaaacatgaa
gatattatggagacactgtataaaaactatacatctttaccttgcataaagggcaataaa
aatattagacagcgagaaccaaagagtaccaatggtgataacaaagtatattctgtcctg
ctggcgatacggaaggctcttcaggagcaaattgaggaaactcctgccagggagctttgc
attctgactactttggctaaaagtagtcccccagctctggaggaggctttgaggagaata
aaggtcattcgagaaacagagctgtctacagctgctgatccacaggcatcttatccttct
tccgaggaatcgttgaagcatttgttgtggctttgtgattctgaggcagtgtttgaagct
gctttaggcctttatgatttaaatctcgctgcaattgttgcattaaattcacaaagggat
ccaaaagaatttctgccacttcttcaagaattggaacgcatgccaacacttttgatgcag
tacaacattgaccttaaattacaaaggtatgaaagtgctctgaggcacatcgtttctgca
ggagacccttattatgaagattgcatgaacctgatgaacaaagttccggaactttatcca
ttgggacttcagttgattgttgatcctcgtaagagacagcaagttcttgaagcatgggga
gatcatcttaatgccacaaaatgcttcgaggatgcggctaccacttatttgtgttgcttt
tgtttggaaaaggcattaaaggcttatcgtgcttgtggtaattggatgggggttctgacg
gttgctggccttatcaaccttgggaaggatgatcttttgcagctggcacgtgaactttct
gaggaacttcaggcccttggtaaaccaggagatgctgcaaaaatactcttggagtattgt
ggtgatgttgacaatgcaattagcctcttggtggatgcaagggattgggaagaggctctg
aggattgctttcttgcacagaagagaagacctggttttagcagtgaaaaatgcctctcta
gagtgttcaagcatgcttaatggggaatacaatgaaggggtggaaaaagttggcaagtac
ttgacccgctacctagcggttcgccaaagaagattattactcgctgcagcacttaaatca
gatgagcaacctcatcttgatgatgaaactgcttcacaggctagcagtaattttagtgga
atgagtgcttacaccacaggaacgagaaaaggttcaagtgcttcaacctccttcagcaca
tccactaagggtagaggtcgacaacgaaacagagggaaaattagagctggaagccctgat
gaggagatggctctagtagagcacttgaaggggatgtctctcactgaaggagcaaaatct
gagctcaaaactttgttaatttctctggtaatgctaagggaggaagacgccgccagaaag
ttgcaacggacagctgagaagttccagctctctcaaatggcagcagtaaagttagcagag
gatgcaatgacaactgacaaaatcgacgagcatgccttcactttggatcgatacgttgaa
aacctaggaaaggaagtgcagaattcagatgcattctcttggcagtcaaaagtcttggcg
tga
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