Sesamum indicum (sesame): 105177616
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Entry
105177616 CDS
T04135
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like 2
KO
K14411
RNA-binding protein Musashi
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105177616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105177616
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105177616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
105177616
NCBI-ProteinID:
XP_011099132
UniProt:
A0A6I9UJJ2
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Position
LG15:2875598..2882436
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AA seq
364 aa
AA seq
DB search
MSDRKLVVLGIPWDVDTEGLREYMTKFGELEDCIVMKERSTGRSRGFGYVTFATIEDAKA
ALASEHFLGNRMLEVKIATPKEEMRTSSKKVTRIFVARIPPSVTEAAFRSHFEKYGDITD
LYMPKDPTTKGHRGIGFITFANAEAVDDLMVETHELGGSTVVVDRATPKEEDFRPISRMP
QGGGGYGAYNAYINAATRYAALGAPTLYDHPGSMYGRGEAPRGMGKKIFVGRLPQEASAE
DLRQYFGRFGRILDVYVPKDPKRTGHRGFGFVTFADDGVADRVARRSHEICGHQVAIDSA
TPIDDAGPSSNFMMNNPEPFGYGGPMRTYGRMYGSLDFDDWGYGVGGSMSGGRPSRADYR
YRPY
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgaaagctcgtcgtgttgggaattccatgggatgtggatactgaagggttg
agagaatacatgactaaatttggtgaattggaggactgcattgtgatgaaggagcgttcc
actggtcgttctcgtggtttcggatatgtaacatttgccacaattgaggatgcaaaggct
gcattagcaagtgagcatttccttggcaatagaatgcttgaggttaaaatagcaacacca
aaggaggagatgagaacatcatcaaagaaagtgaccaggatttttgtagcaaggattccg
ccatctgtgacagaagctgcattcagaagtcattttgagaaatatggtgacataacagat
ctatacatgccaaaggatccaaccaccaaaggtcatcgtggaattggatttatcactttt
gcaaatgctgaagctgtggatgatctgatggttgaaactcatgaattgggaggttcaaca
gtggttgtggacagggcgacaccaaaggaggaagatttcaggccaattagtcgaatgccc
cagggtgggggtggatatggtgcttataatgcttatattaacgcggcaactagatatgct
gcacttggtgctccaaccttgtatgatcatcctggttctatgtatggaagaggggaggca
cctcgggggatgggcaaaaagatctttgttggtaggcttcctcaggaggcaagtgcagaa
gatcttcgtcagtattttggaagattcggtcgtattttggatgtttatgtgccaaaggac
cccaagagaactggtcatcggggatttggctttgttacttttgctgatgatggtgttgca
gatcgtgtagctcgaagatctcatgaaatatgtggacaccaggttgcaatagattcagcg
acaccaattgatgatgctggtcctagtagtaatttcatgatgaataatcctgaaccattt
gggtatggcggaccaatgcgcacttatggcaggatgtatgggagcctggattttgatgac
tggggttatggtgtcggtggcagtatgagtggtggcagaccctcacgtgcagattacaga
tacaggccttactga
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