KEGG   Sesamum indicum (sesame): 105177637
Entry
105177637         CDS       T04135                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    105177637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sind03400]
    105177637
DNA repair and recombination proteins [BR:sind03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     105177637
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_Vps41 ANAPC4_WD40 RAWUL Beta-prop_DCAF12 Beta-prop_Nup120_160 DUF7165 VWA_3_C HU-CCDC81_euk_1
Other DBs
NCBI-GeneID: 105177637
NCBI-ProteinID: XP_011099156
UniProt: A0A6I9UVR7
LinkDB
Position
LG15:complement(3005982..3016173)
AA seq 758 aa
MHRVANAGNASNAARTSKEKRLTYVLNDADNTKHCAGINCVAVLKSSGPEGCDYLFTGSR
DSTLKRWSLADDGATCSTTFESHVDWVNDVILTGGKVLVSCSSDATVKVWNSLSDGTSAR
TFRQHSDFVTCLAAAEKKSNLVASGGLGGEVFIWDIEATLAPLSKLNDVDEDYSSTTANG
MGSSMTHTSLQPTSSSNNISKPATQCQGYVPLAAKGHKESVYALATDDCGTLLVSGGTEK
VVRVWDPRTGSKTMKLRGHTDNVRALLLDSSGRYCLSGSSDSMIRLWDLGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESVLLCNEDHPILQLALHDDGIWVAT
TDSSLHRWPAEAHNPVKVLQRGGSFLAGNLSFSRARASLEGSTPVPVYREPSCSILGTSA
IVQHEILKNRRHILTKDTVGAVKLWEITRGVVIENFGMISFEKKKEELFEMVSVPAWFTV
DTRFGSLSVHLDTPQCFSAEMYSTDLSIAGKTEDDKVNLARETLKGLLTHWLNKRRQLFG
SQTSTNGEIPSGKDKSTRTLSLSKFDGDASSDNDATVYPPFEFSAVAPPSIVTEGSQGGP
WRKKITNLVGTEDERDFPCWVLDCVLSNRLPPRENTKCSFYLHPCEGSTLQTLTQGKLSA
PRILRIHKVVNYVIEKMLLDKSMDSLNADGNFAKGMPPVVGDGSSHFGLKPWQKLKPSIE
IMCNNKVLTPDMNLATVQAYIWKKPEDLILNYRVVQSR
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgcaccgagtagcaaatgcaggaaatgcatctaacgcagctcgcactagcaaggagaag
aggttgacatatgttttaaacgatgcagacaatacaaagcattgtgctggcataaattgc
gtggctgtattgaagtcatctggaccagagggatgcgattacctcttcactggtagtcgt
gatagcacattaaagagatggtcattagctgatgatggtgcaacctgctcaacaacattt
gagtctcatgttgattgggtcaatgatgtcatactaacaggtggtaaggtgttggtatct
tgctcctcagatgccactgttaaggtgtggaatagtttgtctgatggaacaagtgctagg
acattccgtcagcactctgactttgtcacttgccttgctgcagcagagaaaaaaagcaat
cttgttgcctctggtggccttggtggggaggttttcatttgggatattgaagccacactt
gctcccctctccaaattgaatgacgtagatgaagattatagttctacaactgccaatggt
atgggttcctcaatgacgcatacaagtcttcagcctaccagctcaagcaataacatttca
aagcctgctactcaatgtcaaggatatgttccccttgccgcaaaaggccataaagagtca
gtttatgcattagccaccgatgattgcggaacactgcttgtttctggtggaactgagaag
gtcgtgcgtgtttgggacccaaggactggttctaaaaccatgaagcttagagggcacaca
gataacgttagggcgctactattggattcctctggcagatattgcttatctgggtcctct
gattcgatgatcaggttatgggatcttggccagcagcgatgcgtgcattcctatgctgtg
cacacagactctgtgtgggcacttgctagcactccaacatttagtcacgtttatagtggt
ggaagggatctttctttgtatctgacagacttggcaacgagggaaagcgtattgctttgt
aatgaagatcatcctatattgcaattggcactgcatgacgatggtatatgggttgccaca
acagattcttctctacatagatggccagctgaagcacataatccagtgaaagttcttcaa
agaggtggttcatttctagctggcaacttgtcattttcgagagcaagggcttcacttgag
ggttccacacctgttcctgtttatagggaaccatcatgtagcattcttggaacttcagct
atagtgcagcatgagattctaaaaaatagaaggcatatcttgactaaggatactgttggt
gcagtgaagttgtgggaaattacaagaggtgttgttatcgaaaacttcggaatgatttca
tttgagaagaagaaagaagaattgtttgaaatggtgagtgttcctgcgtggttcacggta
gatacaaggttcgggagtttgtcagtacacttagataccccgcaatgcttttctgctgag
atgtactccactgatctcagtattgctggaaagactgaggatgacaaggttaatttggca
agagaaaccctcaaagggttgttgacgcattggttaaataaaagaaggcagctatttgga
tctcaaacttctacaaatggagaaattccatctggaaaggataagtctacgaggacatta
tccttatctaaatttgacggggatgcttcttctgataatgatgctactgtatatccacca
tttgaattttctgcagttgctcctccttctattgttaccgaaggctctcaaggaggccct
tggagaaagaaaattaccaacctggttggaactgaagatgagagagatttcccatgctgg
gttcttgattgtgtgttgagtaatcgcctgcctccaagggaaaataccaaatgtagcttc
tatttgcacccatgtgaaggttctactctgcagacccttacacaaggaaaacttagcgct
cctcgcattttgagaatacataaagttgtcaactatgtcatagaaaagatgcttctagat
aagtcaatggatagcttgaatgcggatggaaatttcgcgaaggggatgcctccagttgtt
ggagatggttcttctcattttgggctgaaaccgtggcaaaagctcaagccttctatagag
atcatgtgcaataataaggtattaactccagacatgaacttagccactgtccaggcgtac
atatggaagaaacctgaagaccttatccttaactacagagtggtgcaaagcaggtga

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