Sesamum indicum (sesame): 105177947
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Entry
105177947 CDS
T04135
Name
(RefSeq) ubiquitin receptor RAD23c
KO
K10839
UV excision repair protein RAD23
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03420
Nucleotide excision repair
sind04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105177947
09124 Replication and repair
03420 Nucleotide excision repair
105177947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sind03051
]
105177947
03400 DNA repair and recombination proteins [BR:
sind03400
]
105177947
Proteasome [BR:
sind03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105177947
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105177947
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
CUE
UBA_RAD5A
TECR_N
UBA_3
Ubiquitin_2
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
105177947
NCBI-ProteinID:
XP_011099561
UniProt:
A0A6I9UWQ2
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Position
LG15:5254429..5259568
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AA seq
380 aa
AA seq
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MRIFVKTLKGTHFEIEVKPEDTVADVKKNIETVQGADVYPASQQMLIHQGKVLKDATTLE
ENKVAEKSFVVVMLTKNKASSSGAATASAAPSSKTQSVSDTPSPTQPVSAAPTPAPVAAP
PQSAPESAPVPAPTPASSTDVYGQAASNLVAGSNLETTVQQILDMGGGSWDRETVIRALR
AAYNNPERAVEYLYTGIPEQAEVAHAAQPPAGGQPVTNPSQGTQPAVPSGGPNANPLDLF
PQGLPNMGSNASAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEH
QADFLRLINEPVEGEGNILGQLAEAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFFAC
NKNEELAANYLLDHMHEFDD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaggatttttgtgaagactctgaaaggcacccacttcgagatcgaagtgaaacccgaa
gataccgtggcagatgtgaagaagaatattgaaacggttcagggtgctgatgtctaccct
gctagccaacagatgcttatccatcaaggaaaagttcttaaggatgctaccacattggag
gagaacaaagttgcagaaaaaagttttgttgtggttatgttgacaaagaacaaggcctca
tcaagtggagctgcaactgcatcagctgccccatcgagtaagacccaatctgtgagtgat
acaccttcaccaacacagccagtatcagcagctccaacacctgcaccagttgctgcacct
ccacaatcagcccctgaatctgctccagttcctgctcctacccctgcttcctcgacagat
gtgtacggtcaagcagcatcgaatcttgttgctggaagtaacttggagaccactgttcag
cagattctggatatgggaggaggaagttgggatcgagaaacagttattcgcgctctgcgg
gctgcatataataatcctgagagagcggttgaatacctctatactggtattccagagcaa
gcagaagtggcccatgccgctcaacctcccgctggtggacagcctgtgacgaatccatct
cagggtacacagccggcagtaccttccggtggacccaatgctaatcctttagatcttttt
ccacagggtctcccaaacatgggttccaatgcaagtgccggcaccttagattttcttcgc
aatagtcagcagtttcaagctctgcgagccatggtgcaagcaaatcctcaaatcttgcag
cctatgcttcaagaactgggaaagcaaaatccacaactagtacggctgattcaagagcat
caggctgatttcctacgcctaataaatgaacctgttgagggggaggggaacatattaggg
caactcgccgaagcaatgccacaggctgtgacggttacaccagaagagcgagaagcaatt
gagcgtcttgaagcaatgggtttcgatcgagctctagtgttggaagtattctttgcatgc
aacaagaatgaggagcttgctgccaactacttattggatcatatgcacgagtttgacgac
tga
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