Sesamum indicum (sesame): 105177978
Help
Entry
105177978 CDS
T04135
Name
(RefSeq) LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105177978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105177978
Spliceosome [BR:
sind03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
105177978
Complex B
105177978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
105177978
NCBI-ProteinID:
XP_011099600
UniProt:
A0A6I9UKJ6
LinkDB
All DBs
Position
LG15:5569525..5575323
Genome browser
AA seq
507 aa
AA seq
DB search
MGDFGDPMMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP
PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPVQKGETPAERRARIHQIRLEEGAKKAAEE
LEKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETNKPRG
YAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
ANQRPPGREQVQPGGISRSEEPRVERDRDREKSRERGRXXXXXERSREQSHDRSRDRDHR
DDRHHRDRDRNRERDRERDRGRDRDRDRERDRTRDRDRGRDRGRDHDRDRDRDRDRERDR
DRHRERDRERDRDYEIGDDNDRGRSHDRDYDYERADSKHERGERERNYVSGDAEDSRGWP
DQPEHGHGRPETEHGHGHYDYYGNQGRGQYDNPDAQGDYDRYRESDRGHDRYDQMDDDGY
GYDRAASEAQDRDYRRSDRSLSREYEY
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgggggacttcggcgatcccatgatgcgcaaccaaaacgctgccgttcaggcccgtacg
aaggctcagaaccgtgccaatgtcatgcaactgaaattgattggtcagagtcatccaact
ggtttaaccgcaaaccttctgaaattgtttgagccccgcccacctttggagtataaacca
cctccagagaagaggaaatgcccgccatatacaggtatggcacaatttgtcagtaatttt
gctgagcctggtgatcctgaatatgctcctcctgtgcagaagggtgagacgccggctgaa
agaagagctaggattcaccaaatacggctagaggagggagccaaaaaggcagcagaggag
cttgagaaatatgatccaaataacgacccgaatatttctggagatccatacaaaacgttg
tttgtggctaggcttaattatgagacaactgagagcagaatcaaaagggagtttgaggct
tatggccctatcaagcgggttcgcttgattactgataaagagacaaataagcctagagga
tatgcctttattgaatacgtgcatacaagagatatgaaagccgcatataaacaagcagat
gggaaaaagatcgataacaggagggttcttgtggatgttgaacgtggtagaactgttcca
aactggcgtcctcgcaggcttggtggcggacttggaacaactcgggttggtggtgaagaa
gctaaccagagacctccggggagagagcaagtgcagcctggaggaatatctcgatcagag
gagccaagggtggaaagagacagggacagggagaaatcccgtgaaaggggaagannnnnn
nnnnnnngggaaagatctcgcgagcagtctcatgatagatcaagggaccgtgaccacaga
gatgataggcaccacagagatcgcgacagaaacagagagagggaccgtgagagagaccgt
ggtcgagatcgtgatcgggaccgcgagagagatagaacacgggaccgagatcggggtcga
gatcgaggccgtgaccatgaccgtgacagggaccgtgatcgcgatagggaacgtgaccgt
gatcgtcatcgtgagagggatagggaaagagacagggattatgaaattggggatgacaat
gaccgcggtcgttctcatgatagagactatgactatgaacgtgctgactcaaaacatgaa
cggggtgaaagagagaggaattatgttagtggagatgcagaagatagtcgtgggtggcct
gatcagcctgagcatggtcatggacgtccagaaaccgagcatggccatgggcactatgac
tactatggaaaccaaggtcggggacaatatgataatccagacgcccagggtgattacgac
cgctacagggaatctgatcgtggtcatgatcgctacgaccaaatggatgatgatggctat
ggttatgatcgagctgcatctgaggcacaagacagggattaccggcgttcagacaggtca
ctttctcgcgagtacgagtattaa
DBGET
integrated database retrieval system
