Sesamum indicum (sesame): 105177993
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Entry
105177993 CDS
T04135
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105177993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105177993
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105177993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
LRR_8
Motif
Other DBs
NCBI-GeneID:
105177993
NCBI-ProteinID:
XP_011099617
UniProt:
A0A6I9UKL7
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All DBs
Position
LG15:complement(5700865..5711226)
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AA seq
1056 aa
AA seq
DB search
MASGAETYPDSTNLKLRELLKEVQLDYSPANTTIINDVVSSIRDAINSISDGLQVTADVA
PGFVRDVGADKVEFKFRKPKSIEVGGSYSFQCIAKPDVNVDLFLRLPKDCFHEKDYLNYR
YHAKRFLYLCIIKNHLKLSSLVQDVKWSAFHNEARKPILVVYPAARLSDNTVFSLKIIPT
ASSLFTLSKLNFERNNIRSLSQATPKYNNSILEDMFIEDNADFIKRTFTGCKELREALLL
LKVWARKSSLFVHDCLSGFLITVIVAYLASKSGKNRINSSMDPKQILRITLDFIANSKVW
DSGLFFQPEGERSISDKDRKTKLQSFPIIICDSFANYNMAFRMSPSGFQELRDEAALALT
CMDKCTDGGFDEIFMTKIDYPAKYDYCIRLNLKDNHDFHASGFCLDDECWRSYEQRVLCV
IDQALRGRTKLIRVIWRNAPSEYDFENGLSMLDREAMFIGIAIGSMEEAFKQAVIGPSPE
DRDKAVEFRKFWGDKATLRWFRDSRIAEVAVWEHEEWEKHLIIKEMTEHVLMRHLSLPKQ
NIISIVDQLDFVLCHGNRDPISLSKNLLKAFDDLSKQLRGLDDIPLRISSVQPLDSAFRL
TSVFPPSPHPLAHEEGTRIKLEKLTATCIQPLEVMIQLEGSGNWPMDELAMEKTKSAFLL
KIAESLHAKRGITCTATEDDVDVFMSGYAFRLKILHERGLSLVKRQGGAQAKRVLSSDKK
LFLRGQHSSMINGLRGRYPIYGPVVRLAKRWVSAHLFSNSLTEEAIELLVAHLFLKPLPF
RPPCSRITGFLRFLRLLSEYDWNFSPLTIDINGDFTPADVKEINENFMSNRKEYEKNLQN
VKPAMFLATAYDKESEAWTGQSPTAADLRRLAAYATSSANFFTSIIMNNQIDSYGCERIF
RTPLNNYNAVILLHRDKLPYPHRLLFPSEVKQGSVGLPGRHVLCGRASKTFQPFLSPGDM
NGNSEELKNKLMVNFDPLRYFVTDIEREFPDIFKVWYDSFGGDAIGLTCGNQSSKKRGRD
DNGEDNDLLDTLKAVGQLGKGFVKSVHFLKAPKLST
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggagcagaaacctatccggattccacgaatttgaagttgagagagctgtta
aaggaggttcagctggattactctccggcaaatactacaatcatcaacgatgtcgtttcc
tccatcagagacgccatcaacagtatctcggacggcctccaggtcacagctgatgttgcg
ccagggtttgttcgagatgttggtgcagataaagtcgagtttaagttcaggaagcccaag
tctatagaagttgggggaagttattcatttcaatgcattgcgaagccggatgtgaatgtc
gatctttttttgagactgcctaaggattgcttccatgaaaaggactatctaaattatcgt
taccatgccaaaagattcctttatctgtgcatcatcaagaaccatttgaaactttcttct
ttagtccaagatgtaaaatggtcggcatttcataatgaggcacgcaagcctatactggtt
gtttatccagctgcacggttatccgacaatactgtattttccctgaaaataattccgaca
gcttcttctctattcaccttatcaaaattgaactttgagaggaacaatatccgctcccta
agtcaagctacaccaaagtacaacaacagtattctggaggacatgtttattgaggataat
gcagatttcattaagagaactttcacaggatgcaaggaactgagagaggctttgttactt
ttgaaagtttgggcccggaagagctctctatttgttcatgactgcttaagtggtttcttg
atcactgtcattgttgcataccttgcatccaagtctggtaaaaatcgaatcaacagttca
atggaccccaagcagattttgcgcatcacactggacttcattgccaattccaaggtatgg
gatagtggactcttctttcagccagaaggtgaaagaagcatttcagataaggacaggaag
acaaaattgcaatcatttccaataatcatttgtgattcatttgccaactacaacatggca
tttcggatgtcaccaagtggtttccaagagctccgcgatgaggctgctctggcgcttact
tgcatggataaatgtacagatggcggttttgatgagatctttatgaccaagattgactat
cctgccaagtatgactattgcataagattgaacctgaaggacaaccatgatttccatgct
tctggattttgcttggatgatgaatgttggaggtcttatgagcagagggtactgtgtgta
atcgatcaagcattgagagggagaactaagcttattcgagtaatctggagaaatgctcct
tctgaatacgattttgagaatggtttatctatgctggatagagaagctatgtttattggg
attgcaattggatctatggaggaagccttcaaacaggcggtcattggtccaagtcccgaa
gacagagataaggctgtagagtttagaaagttctggggggataaagctacacttagatgg
tttcgtgatagtagaattgctgaagttgcagtgtgggagcatgaggaatgggaaaagcat
ctcatcataaaggaaatgacagagcatgttctaatgcgtcatctatcccttccgaaacaa
aatatcatttctattgtagatcaacttgattttgtgctttgccatggcaatagagaccct
atttccttatccaaaaatttgttgaaggcatttgatgacctgtcaaagcaattgcgaggt
cttgacgacatccctctaaggatatccagcgtgcagccactggattcagcttttaggttg
acatctgtctttcctccctcaccgcatccattagcacatgaagagggcactcgtataaaa
ctggagaaacttactgcaacctgtattcaaccactggaagttatgattcagctcgaaggt
tctggaaactggccaatggacgaacttgctatggagaagactaagtctgcatttctcctc
aaaattgcggaaagcctacatgccaaacgggggattacatgtacagctacagaggatgat
gtagatgttttcatgtctggatatgcttttcgtctaaaaatcttgcatgagagaggtttg
agcttggtcaaaagacagggtggtgcacaagcgaagcgtgttctctcttcagacaagaaa
ctttttcttcgtggtcaacattctagcatgattaatggtttgcgaggccgttaccctata
tatgggcctgttgttcggcttgcgaaacgatgggtatctgcacatctattttcaaactca
ttaacagaagaggcaattgagctgttggttgcacacttatttttgaagcctttgccattt
agaccgccgtgctcccggataactggatttttaagattcctaagattgctgtcagagtat
gactggaatttttctcctttaactatcgacatcaatggtgatttcactcctgctgatgtc
aaagaaataaatgagaatttcatgtcaaataggaaagagtatgaaaagaatctgcagaat
gttaaacctgctatgtttttggcaactgcttatgacaaggaatctgaagcttggaccgga
caatcaccgacagcagcagaccttaggcgattggcagcatacgcaaccagcagtgcaaat
ttttttaccagcatcatcatgaataatcagattgattcttatggatgtgaacgcattttc
cgcacacctctgaacaactacaacgctgtcattctcctgcacagggataaactgccttat
ccacatcgtcttctgttcccatctgaagtcaaacaaggttcggttggtcttcctgggagg
cacgtgctatgtgggagagctagcaaaactttccaacccttcttatcgcctggagatatg
aacggaaattcagaggaactgaagaacaaattgatggtgaactttgatccactaagatat
tttgtaactgacatcgagagagagtttccggacatatttaaggtgtggtatgattctttt
ggaggtgatgccattggcttgacatgtggaaatcaaagttccaagaagcgaggaagagat
gataatggtgaggacaacgatctacttgacacactgaaagctgtgggtcaactcggcaag
ggattcgtaaaaagtgtacatttcctcaaggccccaaaactaagcacttga
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