Sesamum indicum (sesame): 105178120
Help
Entry
105178120 CDS
T04135
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105178120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105178120
03029 Mitochondrial biogenesis [BR:
sind03029
]
105178120
Membrane trafficking [BR:
sind04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105178120
Atg1 complex
105178120
Mitochondrial biogenesis [BR:
sind03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105178120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
105178120
NCBI-ProteinID:
XP_011099793
UniProt:
A0A6I9UEU7
LinkDB
All DBs
Position
LG15:6930300..6938025
Genome browser
AA seq
643 aa
AA seq
DB search
MASSHGNTHSEPAKMEQIITEFFAKSLHIILESRSPYVSSRNNYSGEQVLSSPSPSSSPS
SSSFKPRDKWFNLALRDCPAALENIDFWRQSNLEPMIVDVILMQRPNDWDPSSFSPKRGL
ARNSSGKERYYYGSDNDECGCEAKNEKIIERWVLQYESKKSSGNGGGSSGSKRSSSTSSH
ALYKKSILLLRSLYATVRLLPAYKLFRDLISSAQIRLYNLGHRVSSFVEPFTHREEADMQ
RFVFTPVDTSCGRLCLSVLYRSSVLDVSSEPSTPISPQIIPEYVGSPMAEPLKRFPSVPV
SQSSPSSSPFGRRHSWSYDLYRASPPSMNPSPSPTYSESHASLSKQRSHRLPPAGLPRHL
HDETPAAHMKNPSYDEYSPSPVFSPSPSPSPPPPTYVSGGNITKALLRSESAPVSIPASR
LSSMPSLPNNQLMLPSPPMKGTRFTVSKHAAHPGLHQTSSTVDKLFSFSKDEPGKMLGVK
PSTNSSPSKSFSRSSSRLSFQDDYDDSEFSGPFIVDEDDMVDPGSRPGSFDLPGHSSIPH
EPGGIFPVKKSQDAAVGALVHMLKKAPPLRQDISVTTQLPQGSKLHTLRSCMQDTNETSE
EPTSNLSSSGLIASKTTADALEELRGYREMKDLLIMQSKISQA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctcatgggaacactcattcagaacctgccaaaatggaacagataattaca
gaattttttgcgaaaagccttcacataatactggaatcgcggtccccgtatgtttcatca
cgtaataattacagcggcgagcaagttttatcctccccatccccttcctcatcgccttcc
tcctcaagttttaagccaagggacaagtggtttaatctagctctgagggattgtcctgct
gccttagagaatattgacttttggcggcagagtaatctggagccaatgattgttgatgtc
attttaatgcagaggccaaatgattgggacccctcaagtttctctcctaaaagaggactt
gcacggaattcatccgggaaagagcgttattattatggttcggataatgatgaatgtggg
tgtgaggcgaagaatgaaaagatcattgagaggtgggttttgcagtatgagagtaagaag
agtagtgggaatgggggtggttcatctgggagtaagaggtcgagttcaacaagctctcat
gcattgtacaagaagtccatactattattaaggtccttgtatgccaccgttagacttttg
cctgcttataagttattccgtgatctcatttcgtctgcgcaaattcggttgtataatctt
ggccaccgggtttcatcttttgttgaaccattcacccatagagaagaggcagatatgcag
cgattcgtatttactccagtagacacttcttgtggtaggctttgcctctcagtcttgtat
cgctcatcagtattggatgtgagttcggagccttcaacccctatatcaccacaaatcatt
ccagaatatgtggggagtcccatggcagaaccattgaaaaggttcccatctgttcctgta
tcacaaagctccccatcttcatctccatttggtaggcgtcacagttggagttatgacttg
tatagagcatcaccgccttcaatgaatccgtcaccttcacccacatattcagaatctcat
gcctcattgtcaaaacagcgttcccaccgtcttcctccagcaggtttacctcggcattta
catgatgaaacacctgcagctcatatgaaaaatccaagttatgatgagtattcgccttcc
cctgtgttttcaccgtctccatctccatcaccaccaccacccacctatgtttctggtggt
aatataactaaggctcttttacggtctgaaagtgctcctgttagcataccagcatctagg
ctttctagcatgccttcactgccaaacaaccaactgatgcttccttcacctcccatgaaa
ggtactcgctttactgtttctaagcatgctgcacacccaggacttcaccaaaccagctca
acagttgacaagttgttctctttcagcaaggatgagccaggaaagatgctgggtgtgaaa
ccatcaacaaacagctcgccatcaaaatctttttctagaagctcaagtaggctatcattt
caggacgattatgatgattctgagttttctggaccatttattgtagatgaggatgacatg
gtagatccaggttccagaccaggctcttttgatctgccaggacattcatccataccccat
gagcctggtgggatctttcctgttaaaaaatcacaagatgctgcagtgggtgctcttgtt
catatgctgaagaaagcaccgccgcttcgtcaagacatttctgttaccactcaacttcca
cagggttccaaacttcacactctgaggagctgcatgcaagatactaatgagacttctgaa
gagcctacttcgaatctttcgtcctccgggcttattgcatccaagactacagctgatgca
ctggaggagctccgggggtatagagaaatgaaagacttgctgattatgcaaagtaaaatt
tctcaggcatag
DBGET
integrated database retrieval system
