Sesamum indicum (sesame): 105178218
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Entry
105178218 CDS
T04135
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105178218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105178218
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105178218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
105178218
NCBI-ProteinID:
XP_011099941
UniProt:
A0A6I9UF46
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Position
LG15:8024788..8039617
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AA seq
967 aa
AA seq
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MRTRSQSKRPQSVGEQEDMKSRHVPDSIDDNETLSNISRDAVGKLLKRVNKGFNKENVGY
LRQWESAATMERGSRDIDKRSAGTAVEKGTAEPECYGREAMQYASSPEKDEDDKDYDDSE
WEDGSIPALSSMKDFHEDLASGISVEFDVSDCLPKRKPVRRATAEEKEVAELVHKAHLLC
LLGRGRLIDCACNDPLIQASLLSLVPTHLLKIAESSKLTASRLVPLVSWFHNNFHVRSQS
VAEKSCHSALASTLETREGTPEAVAALSVALFRALNLTTRFVSILDVVSLKPDGDISEHI
MEVCSKRGRDIFSSSTLMVAGPSCSSASTSKSPTGVEHGISQSAAGGAGRHKADKSKKNG
LQCQDSLTIDKPKDKMSDVAVPETPIDISEPCLVKSDGLKRKGDLEFQMQLEMALSATAI
GSSKISMASSASESPSRSSTLTPPSKRMRKIKKEESQTSSDGISTAIGSKKVGAPLYWAE
VFCCGENLTGKWVHVDAINGIVDGEHKVEAAALACKKSLRYVVAFAGQGAKDVTRRYCTK
WYKVAAKRVNSSWWDAVLAPLRELESGATGGGVNLEYEASSHEKNEESQVANSNHGCSID
KNHSCGACKECSEKQVEGSSMRKSFASTRSSLEDMELETRALTEPLPTNQQAYRNHQLYV
IERWLNKNQVLYPKGPVLGFCSGHAVYPRTCVRTLRTKERWFREGLQVKAGEVPAKVLKR
SLKRGKEEAADDNNYTDGDHQDITALYGRWQTEPLHLPRAVNGIVPKNERGRVDVWSEKC
LPPGTVHLRLPRVAAVAKRLDIDYAHAMVGFEFRNGRSAPLFEGIVVCTEFKDAILQAYL
EEEERREAEEKRRNEALALSRWYQLLSSIITRQRLNSCYGAGALSQPSSEIPKSDDKCST
SATRAQEIVASPRCQQDDTSEKPYVLPSMPEENHEHEFVLDKEVFGEEGPTQVKRCRCGF
LVQFETI
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccagaagccaatccaagcgcccccaatcagtgggtgaacaagaagacatgaaa
agccgtcatgtaccagatagcattgatgataatgaaactctttcgaatatttcaagagat
gctgtgggaaagcttttgaaaagagttaacaaagggttcaataaagaaaatgttggctat
ttgcgccaatgggaatctgcagctacgatggagagaggatcaagggacattgataaaaga
tctgctggtacagcagtagagaagggtactgcagaacccgaatgttatggtagagaagca
atgcagtatgcttctagtccagaaaaggatgaggacgataaagattatgatgactctgaa
tgggaagatgggtccattcctgcattatcttccatgaaggattttcatgaagatttagcc
agtggaatatctgttgagtttgatgtttcagactgcttgccaaagcggaagcctgtccgt
cgagctactgcagaagagaaggaagttgcagagttggtgcacaaggctcatttgctttgt
cttctgggaaggggaaggttgatcgattgtgcttgtaatgatcctcttattcaggcttct
ctactttctctggttccaacacacttgctgaagatagcagaatcctctaaacttactgcc
agtcgtttggtccctcttgttagttggttccacaacaatttccatgttagaagtcaaagt
gtagctgagaaatcatgtcattcagcactggcatcaactttggaaactcgagagggaaca
ccagaagcagttgcagcattatctgtggcactatttagggcgctgaatctcacaactcgg
tttgtttcaattttggatgtggtctccttgaagcctgatggtgatatatcagagcacatc
atggaagtttgcagcaagagaggacgagatatatttagctcatcaactctgatggttgct
ggacctagctgttcctctgcttccacttcgaaatcaccaacaggggttgagcatggaatc
agccagagtgctgcaggaggtgctggcaggcataaggctgacaaatcaaagaagaatggg
ttgcaatgccaagattctcttactattgataagccgaaagataaaatgtcagatgtagcg
gtccctgagaccccaattgatatttctgaaccctgccttgtaaaatctgatggattgaag
aggaaaggagatcttgaatttcaaatgcagttggaaatggctctctcggctacagcaatt
ggaagttctaaaataagcatggcatctagtgcatcagaatcacccagcaggtcctcaact
ctcactccaccttctaaaagaatgagaaaaattaaaaaagaagaatctcagacttcctca
gatggaatatctacagctattggatcaaaaaaggtgggagcgccactttattgggcagag
gttttttgttgtggagagaacttgactggaaagtgggtgcacgttgatgctatcaatgga
attgtagatggagagcataaagtagaagctgcagcccttgcatgcaaaaaatctttgaga
tatgtagttgcttttgctggtcaaggggctaaggatgtgactcgcaggtattgtacaaag
tggtacaaggtagcagcaaaaagggtcaattctagctggtgggatgcagtgttggcacca
ttgagggagttggagtcaggtgcaactgggggtggtgttaatttggaatatgaagcttca
tcacatgagaagaatgaagagtcccaagtggcaaactcaaatcatggctgctctattgat
aagaaccactcatgcggagcatgcaaagagtgttctgagaaacaggttgaggggtcctct
atgaggaaatcttttgcttctaccaggagctccctggaagatatggaactagaaactaga
gcactaactgaaccacttcctacgaatcaacaagcctacagaaatcatcaactgtatgtg
attgaaagatggcttaacaagaatcaagttctgtatcccaaggggcctgtactgggattt
tgttctgggcatgctgtgtatccgcgtacttgtgtccgaacacttcgtacaaaggaaagg
tggttccgtgaggggctgcaagtgaaagctggtgaagttcctgctaaggttctcaagcgt
tccctgaagcgtggtaaagaagaagctgcagatgacaacaactacactgatggggatcat
caagatattactgccctttatgggaggtggcagacagaaccactgcatctacctcgagct
gttaacgggattgtgcctaagaatgaacgtggtcgagtggatgtgtggtctgagaagtgc
ctcccaccaggtacagtccatttgcgcttgccaagagtggcagctgtagcgaaaaggctg
gatattgattatgctcatgcaatggttggatttgagttcagaaatggtcggtctgctcct
ctatttgagggtattgtagtttgtactgagtttaaggatgctattctacaggcatattta
gaggaagaagagagaagagaggctgaagaaaaaaggagaaatgaagcactggcactatca
aggtggtatcagcttctttcttccatcattactcggcagagattgaacagctgctatgga
gctggagcattatcacaaccctccagtgaaatcccaaaatcagatgataaatgctctaca
tcagctactcgtgcccaagaaattgtagcatctccaagatgccaacaagatgacacttct
gaaaaaccttatgttttaccctctatgcccgaagaaaaccacgaacatgaatttgttttg
gacaaggaggtgtttggtgaagaaggcccgactcaagtgaagcgatgtcgctgtggattc
ttagtacagtttgagacaatatag
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