Sesamum indicum (sesame): 105178227
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Entry
105178227 CDS
T04135
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105178227
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105178227
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
DUF4627
Motif
Other DBs
NCBI-GeneID:
105178227
NCBI-ProteinID:
XP_011099955
UniProt:
A0A6I9UF57
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Position
LG15:8191626..8199254
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AA seq
691 aa
AA seq
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MIFLAKIVLEMIERMGRLMARQRHWWNHYLILGVALQLFFLVGCSQSLHSKKLMEDNNQV
DLSSPAVQLLRQDQHVVMSNGLVSITLTVPGGAITSVTYKGSDNLLDTQDRREDDRGHWN
IFWSKVPEGGTLVDNLEGTSYKIIVENENQIEISFTRIWTSNSSNAPLNVDKRYVMLRGS
PGFYSYAVLERLKGWPAFDIEGGRIVFKLRKDKFHYMAMSNERQRIMPTSGDRLTGKILD
YKEAVLLTNPTNPEFKGEVDDKYFYSCDNQDSQVHGWISSDPHMGFWMITPSNEFRTGGP
NKQDLTSHVGPTVLAVFMSRHYVGKDIDLKFQTEEYWKKVLGPVFVYLNTNSSTNSDPSL
LWNNAKQRMQKEIENWPYSFPLSEDFVKANKRGTVSGQLFVDDWYKNKHVMPGASAYVGL
ASPGATGSWQFQSKGYQFWTQTNHNGSFLIKNVIPGTYNLFAWVFGTLGDYKYSSNITIY
PGSNVKARNVVFKAPRKGPTLWEIGIPDRSAAEFFIPDPSPEFKIHKYRVEIEKFRQYGL
WTRYQDLYPQNDLVFTIGTSNYTKDWFFAHVTRKVRNDVFIPTIWQILFDLKNVSQGANY
TLQLALASANNAELQVRLNNRKSPPDFTTGVIGKDNALARHGVRGSYHFYSIDVAGSKLV
VGRNIIYLTQVRSEGPFTEVMYDYISLEGPA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgatatttttggcgaaaattgtgctggaaatgatcgaaagaatgggaagattgatggcc
cggcaacggcattggtggaatcattacttgattctgggagtggctctgcagttattcttt
ttggttggctgttcccagagtttgcatagtaaaaagcttatggaagacaataatcaagtt
gatttgtcatctccggctgtgcaattgcttcgacaggatcagcatgttgtaatgagtaat
ggattagtcagcataacactgacagtaccaggtggtgcaatcaccagtgtgacttacaaa
gggagtgacaatttgctcgacacacaagatcgtagagaagatgacagagggcactggaat
attttttggagcaaggtaccagaaggtggcacattggttgacaacttagaaggaacaagt
tacaagatcatagtagaaaacgaaaatcaaatagaaatttcatttaccagaatatggact
tctaatagttcaaacgctcctttaaacgttgataaaagatatgtaatgctgcgcggctcg
cctggattctattcatatgctgtgctcgaacgtttaaagggatggcccgcatttgacatc
gaaggaggaagaattgtcttcaagcttcggaaagacaagtttcactacatggctatgtca
aatgagaggcaaaggattatgccaacatctggtgatcgtcttactggcaagattcttgat
tataaggaagctgtcctcttaacaaatccaaccaatcccgagttcaaaggggaggtggat
gataagtacttctactcatgtgacaaccaagacagccaagttcatgggtggataagcagt
gatcctcacatgggtttctggatgataacacccagcaatgagtttcgtacaggcggacct
aataaacaagatcttacttctcatgttggtccaactgtgcttgctgtatttatgagcaga
cattacgttggaaaagatatagatctcaaatttcagactgaagagtattggaaaaaggtt
cttggcccagttttcgtttatctaaacacaaattcttctacaaattccgatccttctctc
ctctggaacaatgccaaacaaaggatgcaaaaggagatagaaaactggccatatagcttc
ccactttcagaagactttgttaaagccaataaaaggggaactgtaagcggccaattattt
gttgatgactggtacaagaataagcatgtcatgcctggagcctcagcttatgttggattg
gcttcaccaggagcaactgggtcatggcagtttcaaagcaagggttatcaattttggacg
caaacaaatcataacgggagtttcttgattaaaaatgtgatacctggaacctacaacttg
tttgcatgggttttcggaacccttggggattacaaatattcgtctaacatcactatctac
ccaggatctaatgttaaggcaagaaatgtggtttttaaggctccaagaaaaggtccaact
ttatgggagattggaattcctgatcgctcagctgctgagttttttattccagatcctagc
ccggaattcaagatacataaatacagagttgaaattgaaaagtttcgacagtatggactt
tggactcgttatcaagatttgtatccacaaaatgatctagttttcacaattggcaccagt
aattatacaaaagattggttttttgcacatgttacaaggaaagtgagaaatgatgtgttc
ataccaacaatatggcaaattttgtttgacctcaaaaatgtctctcaaggggcaaattac
actctacaattggcgcttgcatccgcaaataatgctgagttacaagtgcgtctcaataat
cgaaaatcacctccagatttcaccacaggggtgataggcaaggacaatgcactagcaagg
catggcgttcgtggatcgtaccatttttacagtattgatgtagcagggagtaaacttgta
gttgggagaaatataatatatttaacacaagtaagaagtgaagggccattcactgaagtc
atgtatgattatatcagtttagaaggtcctgcataa
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