Sesamum indicum (sesame): 105178367
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Entry
105178367 CDS
T04135
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03440
Homologous recombination
sind03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105178367
03460 Fanconi anemia pathway
105178367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sind03032
]
105178367
03400 DNA repair and recombination proteins [BR:
sind03400
]
105178367
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105178367
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Topoisomerases
105178367
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105178367
FA (Fanconi anemia) pathway
105178367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Toprim_4
Motif
Other DBs
NCBI-GeneID:
105178367
NCBI-ProteinID:
XP_011100133
UniProt:
A0A6I9UFH1
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Position
LG15:5998063..6014708
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AA seq
906 aa
AA seq
DB search
MAGGGGRPLRALNVAEKPSVAKAVSGILARNPSSGGLRVREGRSRYNKIFEFNYAIQNQQ
FHMAFTSVTGHLMEVEFEDRYRKWHSCDPVDLYHAPVKKHVPHDKSDIEKTLEEEARKSQ
WLILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYAAQHLIRPNQLFA
DAVDVRQEIDLRIGASFTRFQTMLLRDAFVLDFTTDDKNVILSYGPCQFWEIQSHEPEEF
WTINCTHNSEEGTATFNWMRGHLFDYTCATILYEMCVQEPTATVTNVRQQEKPKYPPHPL
STIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDCFSERTDLHRIVQDQQAHP
IWGSYAQRLLDPESGLWRNPSGGGHDDKAHPPIHPTKFSSGESGWSQDHHKVYELVVRHF
LACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYTYGQQFT
PTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSSMRFSP
TKLGEALVMGYDDMGYELWKPYLRAAMESDMKAVSMGTKSKAEVLEACLQQMKACFLDAR
LNKGKLFEAMAVFFERSNRSNGNEPYAIGDVLRRCGLCQESDMVLRRKPDGNFMVGCLGY
PQCRNVVWLPGSVSEAAVTSNICSTCSPGPVYMIQFKFRRLEIPPNYNVDHLGCIGGCDN
TLRQLVEICGTGSRNNSNMPGRGQGHTQSSSSAQSNSRSQGAWHTAHSSSSYTSQSSRGR
SAQTQDAAGEDGESSIPCASCGAPCNLRTANTPANRGRKFYSCQAQGCNFFIWEDNANSG
GTVPRGSTSRSASTSSRRGGRGRSNQSRGRANDVAFVSATGEPISGRCFVCGDPSHFANA
CPNRGR
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcggaggacggccgttgcgggcgctgaacgtggcggagaagccttcggtg
gctaaagcggtttctggtatacttgcgaggaatccatcaagcggcggactgagagtgagg
gaggggcggtccagatacaacaagatattcgaattcaactacgccattcagaaccagcag
tttcacatggcgttcacttccgtcaccggccatctcatggaggtcgaattcgaggatcgc
tatcggaaatggcactcatgtgaccccgtcgatctctaccatgcccccgtcaagaaacat
gtgcctcatgataagtcagacattgagaagacactcgaggaggaagctagaaagtctcag
tggcttatcttgtggcttgattgtgacagagaaggagaaaatatagcatttgaggtggta
gaagtttgtacccgggcgaatcgcaatctcaacatctggagagctcgtttctctgccctg
attgatagggaaattcattacgctgcacagcaccttattcggcctaatcaattgtttgct
gatgctgtagatgttcgacaagaaatagatcttcgaataggtgcttctttcacccgtttc
caaactatgcttctgagagatgcatttgtcctcgatttcactacagatgacaaaaatgtg
atcttgagctacggtccttgccagttctgggaaatccaatcacatgaacccgaagagttc
tggactattaactgtactcataattctgaagaaggcactgctacatttaattggatgcgc
gggcatttgtttgactacacatgtgcaacaatactatatgaaatgtgtgttcaggaaccc
actgctactgtaacaaatgttagacagcaggagaagcctaaatatcctcctcatcctttg
agcacaattgagcttgagaagcgtgcttcacgttacttcagaatgagttccgaacagacc
atgaaggtagcagaagatctatatcaagctggttttataagttatcctcgtacggagact
gattgcttctcagagagaacagatctgcatagaattgtacaagaccagcaagcacaccca
atatggggctcatacgcccagcgcttgctggatcctgaatcaggtctttggagaaatcct
agtggtggtggacatgatgataaggcacacccacctattcacccaacaaaattttcatct
ggagaatctggatggagtcaagaccaccataaagtgtacgaattggtcgttcgccacttc
ctggcatgtgtttctcaacctgccataggagctgaaactacagttgaaattgacattgct
ggtgaacaattttctgcatctgggagggtcataattgctaaaaactacttggatgtttat
agatttgaaacatggggaggttctgtgattccgacatacacctatgggcaacagttcacc
cctacaacactgactcttgactcaggagttaccagacctccacctcttttaagtgaagct
gatttactaagttgtatggataaggcaggtattggaacagatgcaacaatgcatgatcac
ataaaaaagcttcttgatcgattttatgccactaaagactcaagcatgcgtttctcacct
acgaaacttggtgaggcactagtaatgggatatgatgacatgggttatgaactgtggaaa
ccatatctccgtgctgcaatggaaagtgatatgaaagcagttagtatgggcacgaaaagt
aaagctgaagttttggaagcttgtctacaacaaatgaaagcctgctttctcgatgctaga
ttaaataaaggaaagctttttgaagccatggctgttttctttgagagatcgaacagatct
aatggcaatgagccttatgcaattggggatgttctccgaagatgtggtctttgccaggaa
tcagatatggtgctcagaagaaagccggatggaaatttcatggttgggtgcttgggctat
ccgcaatgtaggaatgtcgtgtggcttcctgggtctgtatccgaagcagcagttacctca
aatatctgcagtacttgctccccaggccctgtttacatgattcaatttaaatttcgtcgg
ctggaaataccgccaaactacaatgttgatcatttgggttgcattggtgggtgtgataat
actctaaggcagctagtggaaatctgtggaactggttcccgcaacaactccaacatgcct
ggaagagggcaagggcatacacaatcatcaagcagtgcccaaagtaattccagaagtcag
ggtgcttggcatacagcgcattcttctagctcatatacttctcagagttcacgaggtcgt
agtgcacagactcaggatgctgctggagaagatggagaatcctcaattccatgtgcatcc
tgtggggcaccatgcaatttgcgcacagctaatactccagccaatagaggaagaaagttc
tattcatgtcaagctcaaggctgcaacttctttatttgggaagataatgccaacagcgga
ggaacagtcccacgaggaagtaccagcagatcagcatctacttccagcaggagaggtggt
cgtggcaggagtaaccaaagtcgaggacgggcaaatgatgtagcattcgtttctgctact
ggtgagcccatatccgggaggtgctttgtttgtggcgatccatcacactttgcaaacgct
tgtcctaatcgggggaggtaa
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