Sesamum indicum (sesame): 105178473
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Entry
105178473 CDS
T04135
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105178473
04121 Ubiquitin system [BR:
sind04121
]
105178473
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
Other 90S particles
105178473
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105178473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WD40_RFWD3
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
PROPPIN
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
VID27
Motif
Other DBs
NCBI-GeneID:
105178473
NCBI-ProteinID:
XP_011100246
UniProt:
A0A6I9ULY1
LinkDB
All DBs
Position
LG16:533280..541377
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRALSAAKLDKIFARPFIG
AMDGHIDAVSCMAKNPNHLKGIFSGSMDGDIRLWDLATRRTVCQFPGHQGAVRGLTVSTD
GHVLVSCGTDSTVRLWNVPIPSLMASDDSSDNEAKPLAVYVWKNAFWAVDHQWDGELFAT
AGAQVDIWNHNRSQPVNSFEWGKDTTISVRFNPGEPNILATSASDRSITIYDLRLSSPAR
KIIMRTKTNSIAWNPMEPMNFTAANEDCNCYSYDARKLDEARCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRIWK
AKASEQLGVLLPRERKKHEYLEAVKNRYKHLPEVKRIIRHRHLPKAIYKAASLRRIMTEA
ERKRTERRRAHSAPGSMPKEALRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtgatttctcggtctacagatgaattcactcgagagcgaagccaggac
cttcagagggtttttcgtaatttcgaccctaaccttcggactcaggagaaagctgtcgag
tatgttcgtgctcttagtgcagctaaattagataagatttttgctcgaccatttattggg
gcaatggatgggcacattgatgctgtctcttgtatggctaagaaccccaatcatttaaag
ggaattttctctggttctatggatggagatattcgtctttgggatttggccaccaggcgg
acagtatgccagtttcctggtcaccaaggtgctgtacgaggtctaacagtatcaactgac
ggtcatgtccttgtgtcatgtgggactgattccactgttagactctggaatgttcccatt
ccttctcttatggcttctgatgactcatcagataatgaagccaagccacttgcagtctat
gtttggaaaaatgctttctgggctgttgatcatcaatgggatggtgagctttttgcgaca
gctggagcccaagtagatatatggaaccacaacaggtctcagcctgttaacagctttgaa
tggggtaaagatacaactatatctgtgcggtttaatccaggagaaccaaatatattggca
acatcagccagtgatagaagcattacaatatatgatttacggttgtcttctcctgcacga
aagattattatgaggacaaaaactaattctatagcatggaatccaatggagccgatgaac
tttacagctgcaaatgaagattgcaattgttatagttatgatgcccgaaaattggatgag
gccagatgtgtgcacaaggatcatgtttctgcagttatggatattgattactcaccaact
ggtcgtgaatttgtaactggatcatatgatagaactgttagaatattccaatataatggt
ggtcacagcagagaaatctatcataccaagagaatgcaaagggtattctgtgtcaagttc
agttgtgatgcaagttatgtcatctctggtagtgatgataccaaccttcgaatttggaaa
gctaaagcatctgaacaattgggagttcttttgccaagagagcgtaagaagcatgaatat
ttggaggctgtcaagaatcgttacaagcatcttcctgaggttaagcgcattatcaggcac
agacacttgcccaaagcaatatataaagcagcttctctcaggcgtattatgactgaagct
gaaagaaagagaaccgagaggaggagagcacatagtgccccaggaagtatgccaaaggag
gcattacgcaaacgaagaatcatcaaagaagttgagtga
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