Sesamum indicum (sesame): 105178884
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Entry
105178884 CDS
T04135
Name
(RefSeq) phytochrome B isoform X1
KO
K12121
phytochrome B
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105178884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
PAS_4
PAS_9
HATPase_c
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
105178884
NCBI-ProteinID:
XP_011100755
UniProt:
A0A6I9UGS7
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MATSGSRRTHANDYYSQALPEVQTQAQSSGTEQIHSLHHHANNNITSINRGGGDSMTKAV
AQYTLDARLHAVFEQSGESGKSFDYSQSIRTTNQSVPEQQITAYLSKMQRGGRIQPFGCM
IAVDDSSFRVLAYSENAREMLGLSPQSVPTLQRPEILTIGTDVRTLFTPSSSVLLERAFG
AREITLLNPIWIHSKNSGKPFYAILHRIDVGTVIDLEPARTEDPALSIAGAVQSQKLAVR
AISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIG
LHYPSTDIPQASRFFFRQNRVRMIMDCHATPINVIQDEALMQPLCLVGSTLRAPHGCHAQ
YMANMGSIASLTLAVIINGNDEDGMRGRNLMRLWGLVVGHHTSARYIPFPLRYACEFLMQ
AFGLQLKMELQLASQLLGKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYY
QGNYHPLGVTPAETQIKDIVEWLLKFHGDSTGLSTDSLADAGYPGAATLGDAVCGMAVAF
ITSRDFLFWFRSHTAKEIKWGGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAE
IDAIHSLQLILRDSFGDADAGNSNAVVQAQVRNLELQRMDELSSVAKEMVRLIETATAPI
FAVDVEGRINGWNAKVAELTGLSVEEAMGKSLVHDLVHKESEEIADKLLFHALGGEEDKN
VELRLKTFGTETSKKDVYVVVNACSSKDHTNNIVGVCFVGQDVTEQKVVMDKFIHIQGDY
KAIVHSPNPLIPPIFASDENTYCSEWNTAMEKLTGWSRGDIIGKMLVGEIFGSCCRLKGP
DAMTKFMIVLHNAIGGQDTDKFPFSFFDRDGKYVQALLTANKRANMEGQIIGAFCFMQIA
SPELQQTLTVQRQTEKKCVSKMKELAYICQELRNPLSGIQFTNSLLEATNLTEDQKQLLE
TTATCEKQMLKIVKDVDLVNFEDGSMELEKVEFVLGSVIDAVVSQVMLLLRERGLQLVRD
IPEEVKTLVVYGDQVRIQQILADFLRNMVHHAPSPGWVEMQLKPSLKQISDGITVAHNEF
RIICPGEGLPPQLVQDTFHSNRWVTQEGLALSMSRKFLKLMNGEVQYIIESESCYFLIIL
ELPMR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcaggaagcaggagaactcatgcaaatgattactattcccaagctttacct
gaagttcaaactcaagcgcaatcttcagggacagagcaaattcatagtctgcatcaccat
gctaacaataatattaccagcataaacaggggtggtggcgattccatgaccaaagctgta
gcgcagtacactctggatgcaagacttcacgctgttttcgagcaatctggtgagtctgga
aaatcctttgattattcacagagtattaggactactaatcaatctgttcccgagcagcag
atcactgcttatttgtccaaaatgcagcgtggcggccgtattcaaccctttggttgtatg
atagccgtcgatgattcgagttttcgtgtattagcttactccgagaatgcccgcgagatg
ctgggcttatcgcctcagtcggtcccaactcttcaaaggccggaaattttgactatcgga
actgatgttagaacacttttcaccccctccagctctgttttgctggagagggcatttggg
gcgcgggaaattacattgttgaatccaatttggattcattcaaagaattcagggaaaccc
ttttatgcaattttgcataggatagatgtagggacagtgattgatctagagcctgccagg
acggaggaccctgccctttctattgctggcgctgtccagtcgcagaagcttgcagttagg
gctatttcccatttgcagtcactccctggtggggacattaagcttttgtgtgatacagtt
gttgagagcgtgagggagttgacggggtatgatcgagttatggtttataagtttcacgag
gatgagcacggtgaggttgtggcagagagcaagagaccagatttagagccatatatcggt
ttgcattaccccagcacggatattccacaggcttcaaggtttttctttaggcagaataga
gttaggatgataatggactgtcatgctacccccatcaatgtcattcaggatgaagcattg
atgcagcctctgtgtttagtaggttcaacactcagggctcctcatggttgccatgcccaa
tacatggcaaatatggggtcaattgcttcgttgacacttgctgttatcattaatggaaat
gatgaagatggcatgcgaggaagaaatttaatgaggctatggggattggttgttggccat
cacacttctgctagatacattcctttcccacttcgttatgcttgtgaattcctaatgcag
gcattcggtcttcaactgaaaatggaattacaattggcatcacaactgttggggaaacat
gttctaaggacacagactctgttgtgtgatatgctgctacgggattcacccactgggatt
gttacacagagccctagtatcatggaccttgtgaagtgtgatggggctgcactatactac
caagggaattatcatcctcttggtgtcacacctgctgaaacacagataaaggatattgtg
gaatggttgttgaagttccatggggattcaacaggtttgagtactgatagtctagccgat
gctggttatccaggggcagccactctaggcgatgcggtttgtggaatggctgttgcattc
atcacttcaagagattttttgttctggttccggtcccataccgcaaaagagataaaatgg
ggtggtgcaaagcatcacccacaggataaagatgatggtcagagaatgcatccccgttcc
tcattcaaggcgtttctcgaggtggtcaagagtcgaagtctgccatgggagaatgctgaa
atagatgcaattcattctttgcagctgatactacgagattcatttggggatgctgatgca
ggcaattctaatgcagttgtacaggcccaggttcggaacttggagttacaacggatggat
gaactcagttctgtagccaaagaaatggttaggttgatcgagacagcaacagctcctatt
tttgctgtagatgttgaaggccgcataaacgggtggaatgcaaaagttgcagaattgact
ggactatctgttgaggaagcaatgggaaagtccttggttcatgatcttgttcacaaagaa
tccgaagaaattgctgataagcttctgtttcatgctctgggaggtgaggaggataagaat
gttgaattaaggttgaagacctttggcactgaaaccagtaagaaagatgtatatgtggtg
gtcaatgcttgctctagcaaagaccatacaaacaatatcgttggcgtctgctttgttggt
caggatgtaactgagcagaaagtcgtgatggacaagttcatccacattcaaggtgattac
aaggcaattgtacacagtcccaaccctctgatcccacctatatttgcttcagatgagaac
acctattgctccgagtggaacactgctatggaaaagctcaccggttggagtagaggggat
atcattgggaagatgttagttggggagatatttggaagttgttgtcggctcaagggtcca
gatgccatgacaaagttcatgattgtcttgcacaatgcaattggtggccaagatactgac
aagttcccgttttctttttttgaccgagacggtaaatatgtgcaagctcttttgaccgcg
aacaagagagcaaatatggaaggccagattataggagccttttgcttcatgcagattgca
agtcctgaattgcagcaaactctgactgtccagaggcaaactgaaaagaagtgtgtttca
aagatgaaagagctggcttatatttgtcaggagctaagaaatccattaagtggtatccag
tttactaattcactcttggaagccacaaatttgacagaagaccagaaacagttacttgaa
accactgctacttgtgagaagcaaatgttaaaaattgtaaaggacgttgatctggtaaac
tttgaggatggttcaatggagcttgagaaagtggaatttgtacttgggagtgtaatagat
gctgttgttagtcaagtaatgttattgctgagagaaagaggtctgcaactggtccgcgat
ataccagaggaagtcaagaccctggttgtctatggtgatcaagttagaattcaacagatc
ttagctgatttcttacggaacatggtgcaccatgcaccatctccaggttgggtagaaatg
caacttaaaccaagtctgaagcaaatttctgacggtataaccgtcgcacacaatgagttc
agaattatatgccccggtgaaggtcttccaccccaactggtccaagacacgtttcacagc
aatcgatgggtgactcaggaaggcctagcactaagcatgtccagaaaatttttgaagctt
atgaatggagaagttcaatacatcatagaatcagaaagctgctatttccttatcattctt
gagctacctatgcgttga
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