Sesamum indicum (sesame): 105179033
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Entry
105179033 CDS
T04135
Name
(RefSeq) crossover junction endonuclease EME1B-like isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03440
Homologous recombination
sind03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105179033
03460 Fanconi anemia pathway
105179033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105179033
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105179033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
AAA_13
Motif
Other DBs
NCBI-GeneID:
105179033
NCBI-ProteinID:
XP_011100922
UniProt:
A0A6I9UH53
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MAQPIPVDILSDSDTDSGGNRRWDLRTEAIDLVTPPPSIQSKKKQRTEAFSDPSNSTVFI
IDDDPTPCKKSTSSLGPTSSSTPSVVPETPFSDASIVKCSRGKCSFSGESFATDPFVVAD
TPMREPLESGVSIDKCNAGKHNREPACSTHNDAEINGRICVESDNESESIGEFGAWKHNE
CVSAAKLTKESEIGSRFVESSFSLGTRVQLQKKPPTQNPVKVHMSEGNSSPSFVEDGMSL
AYEDKASTMDAVGQIPSQQDINGCCMKEKKKAYEIMKPKRISKEERLRLLKEKKQLKEQE
KLLKAASKAEAAEMKKYKKEMQKWEKGKYALKSIVAEIDKKVVELGSIGGHLLTRFAEKG
LTYRITSNPMERTIVWTMVVPEEISVIASEPIEISYVLIIYEAEEFCNLVMNESLMDHVQ
SVQHRYPHHTVCYATNRLMAYINKREQAQYKNPANYAGWKRPAIEEVLARLATHFFKVHS
RHCVDEAELAEHVVGLTCSLASCQFRKKLTRLSVNANGSIIPKDCVDKNLIKKNLWLKTL
VAIPKVQPRFAMAIWKEYPTMKSLLRVYMDPTKSVHEKEFLLKDLTTESLLGDERRLGEV
CSKRIYRILMAQCGNIKTDDVENGAGFFTHHST
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccaattcctgttgacattctctcggattctgataccgactccggcggtaat
cggcgttgggatctccggaccgaggctatagacctcgtcactccgccaccgtccattcaa
tcgaagaagaaacagaggacagaggctttttcggaccctagtaactcaacggtcttcatc
atcgacgatgaccccacgccatgcaagaaaagtacttcttcattgggtccgacatcgtcc
tccactccgtcggtcgtccctgagacaccgttctccgatgcctcaatcgtcaaatgttcg
agagggaaatgttcgttttccggtgaaagttttgctactgatccatttgtagttgccgac
actcctatgcgtgagcctttggaatctggagtttcaattgataaatgcaatgcaggaaag
cacaaccgtgaacctgcatgttcaacacataacgatgctgaaattaatggacggatatgc
gtggagtcagataatgaatctgagagtattggagagtttggagcatggaagcataatgaa
tgtgtttctgctgctaaattgacgaaagaatcagaaattggttcgagatttgttgagtca
tcattttctcttggtactcgcgttcaattacagaagaaacctcccactcagaatccagtc
aaagtgcacatgtcagaaggcaattcaagtccaagttttgtagaagatggcatgtctctg
gcatatgaagacaaagctagtacaatggatgctgtgggccaaatcccgagtcaacaagat
atcaatggatgctgtatgaaagagaaaaagaaagcatatgaaataatgaaaccaaagaga
atatcaaaggaggagagacttcgtctgttgaaagaaaagaaacaactgaaagaacaagag
aagctgcttaaagctgcttcaaaggcagaagctgctgagatgaaaaaatataagaaggag
atgcagaagtgggaaaaggggaaatatgctttaaaatccattgtagctgaaattgacaaa
aaagtggttgaactgggatcaattggagggcatctgctcacaaggtttgcagaaaaaggg
cttacatatcgcataacctcaaaccccatggaaagaactattgtatggactatggtagtt
cctgaagaaatttctgtgattgcatctgaaccgattgagatttcttatgttttgataata
tatgaggctgaagagttctgtaaccttgtcatgaatgaatctcttatggatcacgttcag
agtgttcagcatcgttatcctcatcacactgtatgttatgccacgaataggcttatggcc
tacatcaataaaagggaacaagcacagtacaaaaaccctgccaactacgctggttggaag
cgccctgctatagaggaggttttagcaagattagctactcactttttcaaagtacactca
aggcactgtgtcgatgaagctgaattagctgaacatgtggttggtctaacttgcagcctt
gcgtcttgccaatttaggaaaaagttgacaaggttatcagttaatgcaaatggatccatt
atccctaaagactgcgttgacaagaatttaataaagaagaacttgtggttaaagacgctg
gttgctatccctaaggtgcagccacggtttgctatggctatatggaaggaataccccact
atgaaatctcttttgagagtttacatggatcctacaaaatctgtgcatgagaaagaattt
ctgctcaaggatttaaccacagaaagcttattaggtgatgagagacgactgggcgaggtt
tgttcaaagagaatctacagaatactaatggctcagtgtgggaacatcaagacggatgat
gttgagaatggagctggtttctttactcatcactccacttga
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