Sesamum indicum (sesame): 105179038
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Entry
105179038 CDS
T04135
Name
(RefSeq) RNA-binding protein 39 isoform X2
KO
K13091
RNA-binding protein 23/39
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105179038
Spliceosome [BR:
sind03041
]
Common components
Common spliceosomal components
General mRNP proteins
105179038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
105179038
NCBI-ProteinID:
XP_011100931
UniProt:
A0A6I9UQH6
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MDFDEYDYLEKAVEETNGPSKKETPDKEKDREKSEKGYRRRDRSDDDEFDEEEKERKSSS
KKSRSEENGRDREKERDRDRDRERERDRDRDRDRDRDRERSSRHRSRERDSDRERRSSRD
KEKERDRERERDKDKDRERRERDREKERERERRERDKEKEKEREKERERERRSRSRSRLD
RERERELMREREREESRRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVFEFFSQA
GKVRDVKLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLFLGQPVMVKPSEAEKNLVQ
SNTSAGGAGVAGPYGATDRKLYVGNLHFNMTEFQLKQIFEAFGPVELVQLPTDPETGHCK
GFGFVQFAQLEHAKAAQSLNGKLEIAGRTIKVSSVTDHVGVQDSGAKTADFDDDDGGGLA
LNAQSRAMLMAKLDRSGIASSVVGPLGVPALNGSVPSQQAIAMPINPTSVLPTPVLPAQV
VSMAPEPIGTPSECLLLKNMFDPTTETDPEFDLDIRDDVQEECSKYGRVKHIHVDKNSAG
YVYLRFESVEAASRAQQAMHKRWFARRLISAIFLQPYEYDAKFKGTA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgattacctcgagaaggccgtggaagaaaccaacggcccgtcg
aagaaggaaactccggacaaggagaaggatagagagaagagcgagaaggggtacagaaga
agagataggagcgacgacgatgaatttgatgaagaagagaaggagaggaagagcagcagc
aagaaatcgcggagtgaagaaaacgggcgcgatagggagaaggagagggatcgggatagg
gatagagagagggagagggatagggacagggatagagatagggatagggatagggagagg
agctccaggcatcggagtcgagagcgggattctgatagggagagacgcagctcgagggat
aaggagaaggagagggatagagagagggaaagggataaggacaaggatagagagaggaga
gagagggatagagagaaggagagggagagagagaggagagagagggataaggaaaaggag
aaggagagggagaaggagcgagagagggagaggaggagtaggagccgatcgaggctggac
cgtgaaagagagagggaattgatgagagaaagggagcgtgaagagagcaggagatttaag
gataaaaaggaagccgtggagcctgaagctgatccagaaagggaccagagaactgttttt
gcatatcaaatgccacttaaggctacggagagagatgtttttgaattcttttcacaagct
ggaaaggtaagggatgtaaaactcattatggataggaactcgaggcgatcaaaaggagtt
gggtatattgaattttatgatgccatgtctgtaccaatggctatagctctatccggccac
ctattcctcggacaacctgtaatggtaaaaccttcagaggcagaaaagaatcttgttcaa
tcaaatacttccgctggtggtgcaggagttgctggaccatatggtgcaacagataggaag
ctttatgttggcaatttacatttcaacatgacagaatttcagcttaaacagatttttgaa
gcgtttggtccagttgaacttgtccaacttcctacagatccagagacgggacattgcaaa
gggtttgggtttgttcaatttgcacaacttgaacatgcaaaggcagcacaaagtttgaat
gggaaattggaaattgctggtcggaccattaaggtttcctctgttactgatcatgttgga
gtacaagattcaggggcaaaaactgcagattttgatgatgatgatggaggcggtttggct
ttaaatgctcagtcaagagcaatgctcatggcaaagctggatcgcagtggtatagcttca
agtgttgtagggccacttggagtgcctgcgctgaatggatcagttccttcacaacaagct
attgctatgcccattaacccaacatcagtccttccaactccagttcttccggcacaggtt
gtttccatggctccagaacctattggaacccccagtgaatgtttattgttaaagaatatg
tttgatccgaccactgagacggatccagagtttgatctagacattagagatgatgtacaa
gaagaatgttccaagtatggccgggtgaagcatatccatgttgacaagaacagcgctggc
tatgtatatttgaggttcgaaagtgtggaagcagcatcacgtgctcaacaagcaatgcac
aaaagatggtttgctcgtagattgatctccgctatattcttgcaaccttacgagtatgat
gccaaattcaaaggcacagcctga
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