Sesamum indicum (sesame): 105179597
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Entry
105179597 CDS
T04135
Name
(RefSeq) probable small nuclear ribonucleoprotein F isoform X1
KO
K11098
small nuclear ribonucleoprotein F
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105179597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105179597
03041 Spliceosome [BR:
sind03041
]
105179597
03032 DNA replication proteins [BR:
sind03032
]
105179597
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105179597
Spliceosome [BR:
sind03041
]
Complex A
U1 snRNP components
Sm proteins
105179597
U2 snRNP components
105179597
Complex B
U1 snRNP components
105179597
U4/U6.U5 tri-snRNP components
105179597
Complex C
U2 snRNP components
105179597
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105179597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6454
Motif
Other DBs
NCBI-GeneID:
105179597
NCBI-ProteinID:
XP_011101536
UniProt:
A0A6I9ULZ1
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIDGQSTGNL
GEILIRCNNVLYLRGVPEDEEIEEADQD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtaccggttaatccaaagcctttcttgaacaatttgactgggaagcctgtg
atggtaaaacttaaatggggaatggaatacaaaggttatcttgtctccgtggattcatac
atgaacttgcagctcgctaatgctgaagagtatattgatggacaatccactggaaatctt
ggagagatcttgatcagatgcaataacgtcctatatcttcgaggtgtgcctgaggatgaa
gaaattgaagaagcagatcaggactag
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integrated database retrieval system
