Sesamum indicum (sesame): 105179911
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Entry
105179911 CDS
T04135
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105179911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105179911
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
RNases
105179911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Ferritin
Motif
Other DBs
NCBI-GeneID:
105179911
NCBI-ProteinID:
XP_011101874
UniProt:
A0A6I9UMT6
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All DBs
Position
LG2:4611590..4617731
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AA seq
569 aa
AA seq
DB search
MSSSDDETEACSEGKSDVKINAKAFFDVYGPEARAEVVFKQPEANSTLNLHDVQGLATWV
LAEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALYLSQSKVLKTFKECCGIPRAVLALSCV
SDGMQTVDALLTCKLKRKRNEAELIQKKAARTSYQDNHDSISDKESAADLTKNSPFPISY
YTLTAKELEDNGYCCKNPEFISTIPAPSGTPLHEILALDCEMCITSKGFELTRVTLVDIT
GQVLLDKLVKPANAITDYNTRYSGITHEMLEGVITTLKDVQEDFLQLVHKETILVGHSLE
NDLLALKIRHELVIDTAILYRHPRGRSYKPALRVLTRRFLSREIQDSGNGHDSVEDARAT
MELALLKIRHGPSFGFPSEFVRKKLLTLFSDSGKSSSLIDSVSIVKRYASETSHAIPVSS
DDEALTKARKEVKNERVHFIWTQFTELFSYFKKQADDDENLNMKLAEMISLLTCSKPTGR
KSITYNVTSELKNILSRIDNRVKNLYSCLPSNAMLVICTGHGDTAIVQKLRKMLSEQRET
ALCREKIVKVLEELQAQAEVGLCFVGIKH
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcagacgatgaaacggaagcatgcagtgaagggaagtccgatgtcaagatc
aatgcaaaagccttctttgatgtttatggtccagaggctagagcagaagttgtttttaag
cagccagaagctaactcaaccctgaatctccatgatgtccaaggacttgccacctgggtg
cttgccgaagggttcatgccttcgtgggtttttattaaaaacaagcccttaattcccaaa
gtggtcatgctttatgtccctggccttgatgcagcactctatttgtctcagtctaaagtg
ctaaaaactttcaaagaatgctgtggaattcctagagcagttttagcgctcagctgcgta
tcagatggaatgcagactgtggatgcacttctaacatgcaaattaaaaagaaaaaggaat
gaagcagaactcattcaaaagaaagctgcccggacatcttatcaggataatcatgactct
atatcagataaggaatctgctgctgatttaacaaaaaactcgccattcccaatttcttac
tacacgcttactgccaaagaattggaagataatggctactgttgtaaaaatccagaattt
atctcaacaattcctgctccttcaggaactccattacatgagattttggctctggactgt
gagatgtgcattacaagtaagggatttgagcttacaagagttacgctggtggatattact
ggacaggtattgttagataaacttgttaaaccagcaaatgccatcactgattacaacaca
agatatagtgggattacacatgagatgctggaaggtgtgatcacaacccttaaagatgtg
caggaagattttcttcaactggttcacaaggagaccatcctcgttggacattccttagaa
aatgatctgttggctttgaagatccgccatgagttggtgattgataccgctatcttatat
aggcatccacgaggtcgatcttacaaaccagctttgcgtgttttaaccaggagatttctt
tccagagagatacaggattcaggaaatggacatgatagtgtcgaagatgcaagagctacg
atggagcttgcattgctaaaaattagacatgggccttcttttggcttcccttcggaattt
gtgcgcaagaaactcctcacattatttagtgactctggtaaaagctcatctttgatcgat
agtgtgtccatagtgaagcgatatgcctctgagacatctcatgctattccagtatcctct
gatgatgaagctcttacgaaagccagaaaagaggtaaaaaatgaaagggtgcattttatt
tggacccagttcacagaattgttctcttatttcaagaaacaagcagatgatgatgagaac
ctaaacatgaagttagcagagatgatttcattgcttacttgtagcaagcctactggtaga
aaaagcattacatacaatgtaacctcagaactaaagaacattctcagtcggattgataac
agagtcaaaaacctttactcctgtctaccgtccaacgctatgctcgttatttgtacaggc
catggagacactgcaattgtacaaaaattacggaaaatgctttcggagcagagagaaact
gcactctgccgagagaagatagtgaaagtgctggaagagctgcaggcgcaagctgaagta
ggcttgtgttttgttggcattaaacactaa
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