Sesamum indicum (sesame): 105180355
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Entry
105180355 CDS
T04135
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03030
DNA replication
sind03410
Base excision repair
sind03420
Nucleotide excision repair
sind03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105180355
03410 Base excision repair
105180355
03420 Nucleotide excision repair
105180355
03430 Mismatch repair
105180355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sind03032
]
105180355
03036 Chromosome and associated proteins [BR:
sind03036
]
105180355
03400 DNA repair and recombination proteins [BR:
sind03400
]
105180355
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105180355
DNA Replication Termination Factors
ELG1-RFC complex
105180355
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105180355
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105180355
Check point factors
HRAD17(Rad24)-RFC complex
105180355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
AAA_11
Mg_chelatase
AAA_5
AAA_2
AAA_14
AAA_assoc_2
nSTAND3
AAA_24
ResIII
SLFN-g3_helicase
PhoH
AAA_19
AAA_28
DUF3853
AAA_7
AAA_30
NPHP3_N
AAA_18
Parvo_NS1
RNA_helicase
bpMoxR
DNAX_ATPase_lid
AAA_25
TIP49
DUF815
TIP49_C
IstB_IS21
ATPase_2
Motif
Other DBs
NCBI-GeneID:
105180355
NCBI-ProteinID:
XP_020554570
UniProt:
A0A8M8V7M0
LinkDB
All DBs
Position
LG2:4992845..4996495
Genome browser
AA seq
341 aa
AA seq
DB search
MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSARQGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSN
RILYICKEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSISSKDLISVSGVIP
EEVMQALFSACRSGNFDVADKEVKNVIAEGYPVSQMLSQLYDVVVESEDLSDVQKAKICK
KFAEADKCLVDGADEYLQLLDVASNIIRAISNMPQEFSFGS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtgttgcagagctctcagccatgggtggaaaaatatcgaccgaagcaagtg
aaggacgttgcccaccaggatgaggtcgttcgagttctcaccaatactctcgagacaaca
aattgtccgcacatgctattttatgggcccccgggcaccggaaaaacaactacagctctt
gccattgctcatcagcttttcggacctgagttatacaagtctagagtactggagctgaat
gctagtgatgatcgtggaatcaatgttgtccgcacaaaaattaagaactttgctgctgtt
gctgttggttctgctcgccagggtggttatccttgcccaccttataaaattataatcctt
gacgaggcagattcaatgactgaagatgctcagaatgccttgaggcgcaccatggagaca
tactccaaagttacaagattcttcttcatttgtaattacatcagcaggattatagagccc
cttgcatctaggtgtgcgaaattcaggttcaagccactaacagaagaaatcatgagcaat
cgcatattatatatttgcaaggaggaaggtcttaacttggattctgaggctctttcaaca
ttaagttctatttctcaaggtgatctgcgccgggctataacatatttacaaggtgctgct
cgcttatttggttcttcaatttcatccaaggatttaattagtgtgtccggtgtaatccct
gaagaagttatgcaggctctcttttctgcttgcagaagtggtaattttgacgtggcagac
aaggaagtaaaaaatgtaattgctgaaggatatccagtttctcagatgctttctcagtta
tatgatgtagttgttgaatcagaagatttatcagatgtgcagaaagcaaaaatatgcaag
aaatttgctgaggcagacaagtgtcttgtagatggagcagatgagtatttgcaactgttg
gatgtggctagcaatatcatacgtgcaattagtaatatgccacaagaattttcctttggg
agctag
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