Sesamum indicum (sesame): 105180373
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Entry
105180373 CDS
T04135
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105180373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105180373
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105180373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
105180373
NCBI-ProteinID:
XP_011102330
UniProt:
A0A6I9UT44
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MGDNFEEQNKLPELKLDARQAQGFLSFFKSLPNDPRAIRFFDRRDYYTTHGENATFIAKT
YYHTTTAVCQIGSGSDAISSLSVSKNMFETVARDVLLERADHTLELYEGTGANWRLVKSA
TPGNLGSFEEILFANNEMQDSPVIVALIANFRENGCAVGLSYVDLTKRVLGLAEFPDDSH
FTNLESALVALGCKEILLPVEVAKSSEYRSLNDALSRCGAMVTERKKAEFKGRDLVQDLG
RLVKGSMDPVRDLLAAFELAPAALGCIMSYADLLADESNYGNYKIQRYDLARYMRLDSAA
MRALNVMESKADANKNFSLFGLLNRTCTAGMGKRLLHMWLKQPLLDVNEINCRLDLVQAF
VEDGALRQDLRQQLKRISDMERLTRSLEKKRASLVHVVKLYQSSIRLSFIKSALEQYNGQ
FASLIKERYLDPLENWTDDNHLNKFIGLVEASVDLEQLENGEYMISSGYDSQLLALKNEQ
ESLEHQIHDLHRKAANDLDLALDKALKLEKGTQHGYAFRITKKEEPKVRKKLNTQFILIE
TRKDGVKFTNIKLKKLSEHYQKVVEEYKNCQKELVARVVQTAATFSEVFEGVAWSLSELD
VLLSFADVAASSPTPYTRPLITPLDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFIPCDNASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATKRSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIEAPTLFATH
FHELTALAHENAHEQSSKKFIGVANYHVSAHVDSSTRKLTMLYKVEPGACDQSFGIHVAE
FANFPENVVALARAKASELEDFSPITIVAPDAKEMGSKRKRNWDPDDVHRGTERARQFLK
DFSELPLDKMDLKQALQHISKLKADLEKDAVSCSWLQQFL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaattttgaagagcagaacaagcttcctgaactaaaactggatgccagacaa
gctcaagggtttctctcatttttcaaaagcctacccaatgaccctagagccattcgattc
ttcgaccgtcgggactattataccacgcatggcgagaatgcaactttcattgcaaagacc
tattaccacactacaactgctgtatgccaaataggaagtggatctgatgccatttctagt
cttagtgtgagtaagaacatgtttgagacagtggcccgagacgttcttttggagagggct
gatcacactctagaattgtatgagggcactggagcaaattggagacttgtgaagagtgca
acccctggaaatttaggcagttttgaagaaattctgtttgctaataacgaaatgcaagac
tctccagtgattgtggctcttattgcaaatttccgtgaaaatggatgtgctgttggcttg
agttatgttgaccttactaagagggtgcttggattggcagaatttcctgatgatagccac
ttcacaaatttggagtcagctcttgttgcacttggttgcaaagaaatccttttgcctgta
gaggttgccaaatctagtgaatatagatcactaaatgatgcattgtccaggtgtggtgca
atggtaactgaaagaaagaaagctgagtttaaaggaagggatttggtacaagatcttggt
aggctcgtgaaagggtctatggatccagtaagagatctccttgctgcatttgaacttgca
cctgcggctttggggtgtataatgagttatgcagacctacttgcagatgagagcaattat
ggtaactacaaaatccagagatacgatcttgctaggtacatgagactggattctgctgcc
atgagggcactgaatgtcatggagagcaaagctgatgctaacaaaaacttcagcttattt
ggtcttttgaatagaacctgtactgcaggaatgggcaagcgtttactgcacatgtggctg
aaacaacctttattggatgtaaatgaaataaactgtagactggatttggtacaagctttt
gtggaggatggggcactacgccaagatctaaggcagcaattgaaaaggatttcagatatg
gagcgactgacgcggtcactcgagaagaaaagagcaagtcttgtgcatgttgttaagctt
tatcagtcaagcatcagactttcctttatcaaaagcgcactggagcagtacaatggccaa
tttgcttcattgatcaaggaaagatatttggatcctttagaaaactggactgatgataac
catctgaataagttcattggtcttgtggaagcttctgtagaccttgaacaacttgaaaat
ggagagtacatgatttcatcaggatatgattcacagttattggctctcaaaaatgaacaa
gagtctctggaacatcagattcatgatttgcacagaaaagcagctaatgatcttgatctg
gctcttgataaagctctcaaattagaaaaagggacacaacatggatatgcctttaggatt
acgaaaaaggaggagccaaaagtacggaagaagctgaatacccaatttattcttattgaa
actcgcaaggatggggtaaaattcacaaacataaagcttaagaaactaagtgagcactac
cagaaggtagttgaagaatataagaactgccagaaagaattggttgctagagtggtccaa
actgctgcaactttctccgaggtgtttgaaggagtagcttggtcgctctcagaattggat
gttttacttagttttgctgatgtggctgctagctctccaactccttacacacggccactc
atcactccattggatgagggagatattattttggaagggagtcggcatccttgcgttgaa
gctcaagattgggtgaactttatcccgaatgattgtaaactggttagggggaaaagttgg
ttccagattattacaggaccaaacatggggggaaaatcaacgttcatacgacaggttggt
gtgaacattctgatggcacaagttggttccttcataccgtgcgataatgctagtatttct
gttcgtgattgcatttttgctcgtgtgggtgctggtgactgccagctacgaggagtttct
actttcatgcaagagatgcttgagactgcatcaatcttgaaaggagcaactaagaggtcg
ctaataataatagatgagctaggtcgtggcacgtcaacgtatgatggatttggcttagca
tgggccatttgtgagcacatagttgaagtgatagaagcacctacactgttcgctactcac
tttcatgagctgactgcattagctcatgaaaatgctcatgagcaatcttcaaagaaattt
ataggtgtagcgaattatcatgtgagtgcacatgttgactcgtcaactcgcaagcttacc
atgctttacaaggttgaacccggagcctgcgatcaaagttttggtatacatgttgctgaa
tttgctaactttccagaaaatgttgttgcccttgcccgagcaaaggcttctgagttggaa
gatttttcacccatcacaattgtggcccctgatgccaaagagatgggttctaaaaggaag
cgaaattgggaccctgatgatgtacataggggcactgaacgagctcgccagttcttgaag
gacttctctgagttgccactggacaagatggatctgaagcaagcgctacaacacatcagc
aaattgaaagctgacttggagaaggatgcagttagctgttcctggctccagcaattcctc
tag
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