Sesamum indicum (sesame): 110011681
Help
Entry
110011681 CDS
T04135
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Module
sind_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110011681
Enzymes [BR:
sind01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110011681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
110011681
NCBI-ProteinID:
XP_020547959
UniProt:
A0A8M8UVH3
LinkDB
All DBs
Position
LG3:7041946..7045710
Genome browser
AA seq
413 aa
AA seq
DB search
METFAQILVLWWVLLGSSMVSEGHRSALNGHNHTPSTHSKTTHDVTNFGAVGDGNTDDSK
AFQSAWEAACKRKTNNAKVTVPSGKTFLVSPIQFEGPCTSNSITFEILGDIVAPPRSAWT
KKSADEWLSFHRVDGLIVAGSGQGVIDGRGESWWTHGDDRTRPTALRFSHCNELQVRGLK
HRNSQKNHVSINGCNGATISNLDIRAPAKSPNTDGIDISASSNLHIHNCLMATGDDCIAI
NGGTSNVDISNIACGPGHGISIGSLGTDGRHDEVEGISITNSIFTRTDNGVRIKTWQGGS
GFARNITFSKITFVAANNPVIIDQYYCPHKKCANKTSAVKVSHVRYSGLHGTSICKNATI
NFSCSQTVPCTDIVVDDVDIESVYPNDSTTAHCINAHGTAAHALHPAMDCLRN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttttgctcaaatattggttttatggtgggttctactgggttcaagcatggtt
agtgagggtcatcgcagtgccttaaatgggcataatcacactccgtccacccattccaag
actactcacgacgtcacaaactttggagctgtcggagatggaaatacagacgattctaaa
gcatttcagtcagcatgggaggcggcctgcaagagaaagacgaacaacgccaaggtaacg
gtaccaagtgggaaaacatttttggtctctccaatccaatttgaaggtccatgtacatca
aattccattacatttgagatcttgggagacattgttgcgcctccaagatcagcatggacg
aagaaaagtgcagatgaatggttgtcctttcatcgggtagacgggcttattgtggcaggg
agtggacaaggagtgattgatggtcgaggagaatcatggtggacacatggagacgacaga
acgcgacctactgcgctccggttttctcactgcaatgaacttcaagtcagaggactgaag
cataggaacagccaaaagaaccatgtttccataaatggatgcaacggtgcaaccatttca
aacctggacataagggcccctgcaaagagtcccaacacagatggaattgacatcagcgct
tcatccaatcttcatattcacaactgcctcatggcaactggggacgactgtattgccatt
aatggaggtacttcaaatgtagacatatccaatatagcatgtggtcctggacatggaata
agtattgggagtttagggacagatggacggcatgacgaagtagaaggaataagcataact
aatagcatctttactagaactgataatggagtgagaatcaaaacatggcagggaggttcc
ggatttgccaggaacatcaccttctcaaaaataaccttcgtagcagctaataaccctgtt
atcattgaccagtactactgtcctcacaagaaatgcgctaataaaacatctgcagtgaaa
gttagtcatgtgagatactctggactccatggaacatcaatctgcaaaaatgctacgatt
aacttcagctgcagccaaaccgttccctgcactgatatcgtagtggatgatgtagacata
gaatcagtttatccaaatgattcaactactgcccattgcatcaatgctcatgggacagca
gctcatgcactgcacccagctatggactgcctaaggaactaa
DBGET
integrated database retrieval system
