Streptomyces inhibens: KI385_12320
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Entry
KI385_12320 CDS
T08140
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sine
Streptomyces inhibens
Pathway
sine03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KI385_12320 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sine03400
]
KI385_12320 (uvrA)
DNA repair and recombination proteins [BR:
sine03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KI385_12320 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KI385_12320 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
AAA_16
AAA_33
AAA_25
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UKY49512
LinkDB
All DBs
Position
complement(2631723..2634677)
Genome browser
AA seq
984 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPIARQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFSDLQTKGYSRARV
DGETIHLAEPPKLKKQEKHTIEVVIDRLTVKETAKRRLTDSVETALGLSGGMVILDFVDL
DADDPQRERMYSEHLYCAYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELIVP
DEDRSLDEGAIHPWSHGHTKEYFGRLVGALADALGFRTDLPWAGLPARAKKALLHGHKTQ
IEVRYRNRYGRERAYTTPFEGAVPFVKRRHSEAESDSSRERFEGYMREVPCPTCDGTRLK
PIVLAVTVQEKSIAEVAAMSISDCADFLRDMKLNAREKKIAERVLKEVNERLKFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKIADWVVDIGPGAGEHGGKVVHSGPMKQLLTNKESITGHYLSGK
KAIATPDIRRPADPARRLTVHGAKENNLRDIDVSFPLGVFSAVTGVSGSGKSTLVNDILY
THLARELNGAKSVPGRHTRVAGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLDMPIEEALSFFEAVPTISRHLKTLTEVGLGYVRLGQSAPTLSGGEAQ
RVKLASELQKRSTGSTVYVLDEPTTGLHFDDISKLINVLSGLVDKGNTVIVIEHNLDVIK
TADWVIDMGPEGGNGGGLVVAEGTPEEIASVPASHTGKFLREILGDRVSDATTVAAPAKK
PVAKKVAAKKTAAKKTTARARGAS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgctcgcgagcacaacctcaagaacgtctcgctc
gacctcccccgcgactccctcatcgtcttcacggggctctccgggtcgggcaagtcctcg
ctcgccttcgacacgatcttcgccgaggggcagcggcgctatgtcgagtcgctctcctcc
tacgcccggcagttcctcgggcagatggacaagcccgatgtggacttcatcgagggcctg
tcccctgcggtatcgatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
acgatcaccgaggtctatgactacctccgtctgctgttcgcccgtatcggcaagccgcac
tgtcccgagtgcgggcggccgatcgcccggcagtcgccgcaggccatcgtcgacaaggtc
ctggagctgcccgagggcagccgcttccaggtgctctccccgctggtgcgcgagcgcaag
ggcgagttcgtcgatctcttctccgacctccagaccaagggctacagccgggcgcgggtc
gacggggagacgatccatctcgccgagccgccgaagttgaagaagcaggagaagcacacc
atcgaggtggtcatcgaccgcctcacggtcaaggagaccgccaagcggcggctgaccgac
tccgtggagaccgccctcggcctctccggcggcatggtcatcctcgacttcgtcgacctc
gacgcggacgacccgcagcgcgagcggatgtattcggagcatctgtactgcgcctacgac
gatctgtccttcgaggagctggagccgcgctccttctccttcaactcgcccttcggcgcc
tgcccggactgcaccggcatcggtacgcgcatggaggtcgaccccgagctgatcgtcccc
gacgaggaccgcagtctcgacgagggcgccatccacccctggtcgcacggccacaccaag
gagtacttcggccgcctggtcggcgcgctcgcggacgccctcggattccgtacggacctc
ccctgggccgggctgccggcgcgcgccaagaaggccctgctgcacggccacaagacccag
atcgaggtgcgctaccgcaatcggtacggccgcgagcgggcctacaccaccccgttcgag
ggcgccgtgccgttcgtcaagcggcggcactccgaagcggagagcgacagcagccgcgag
cgcttcgagggctatatgcgcgaggtgccctgcccgacctgtgacggcacccgcctcaag
ccgatcgtgctcgccgtcacggtccaggagaagtcgatcgccgaggtcgcggccatgtcg
atcagcgactgcgccgacttccttcgggacatgaagctcaacgcccgcgagaagaagatc
gccgagcgggtcctcaaggaggtcaacgagcggctgaagttcctggtcgacgtcggcctg
gactacctctcgctgaaccgcgcggccggcaccctctccggtggtgaggcccagcgcatc
cgtctcgccacccagatcggctccggcctggtgggcgtgctctacgtcctcgacgagccg
tcgatcggtctgcaccagcgcgacaaccaccggctgatcgaaaccctggtgcggctgcgc
gacatgggcaacaccctgatcgtcgtggagcacgacgaggacaccatcaagatcgccgac
tgggtcgtggacatcggcccgggcgcgggtgagcacggtggcaaggtcgtgcacagcggc
ccgatgaagcagctgctgaccaacaaggagtcgatcaccgggcactatctgtccggcaag
aaggccatcgcgacgccggacatccgccggccggccgacccggcgcggcggctgacggtg
cacggcgcgaaggagaacaacctccgcgacatcgacgtctccttcccgctcggtgtgttc
tccgccgtcaccggcgtctccggctccggcaagtcgacgctggtcaacgacatcctctac
acccacctcgcgcgcgagctgaacggcgccaagtcggtgccgggacgccacacccgggtc
gcgggtgacgatctggtggacaaggtcgtccatgtcgaccagtcgccgatcggccgcacc
ccgcgctccaacccggccacctacaccggcgtcttcgatcatgtccgcaagctcttcgcg
gagacgatggaggcgaaggtccgcggctatctgcccgggcgcttctccttcaacgtcaag
ggcggtcgctgcgagaactgctccggcgacggcacgatcaagatcgagatgaacttcctg
ccggatgtgtatgtgccgtgcgaggtctgccacggtgcgcgctacaaccgcgagacgctg
gaggtccactacaagggcaagtccatcgccgaggtgctggacatgcccatcgaggaggcg
ctgagcttcttcgaggcggtgccgaccatctcccggcatctcaagacgctcaccgaggtc
ggcctcggctacgtccggctcgggcagtccgcgccgacgctctcgggcggtgaggcgcag
cgcgtcaagctggccagcgagctgcagaagcgctcgacgggcagcacggtctatgtcctc
gacgagccgaccaccggtctgcacttcgacgacatcagcaagctgatcaatgtgctgtcc
gggctggtcgacaagggcaacacggtgatcgtcatcgagcacaacctcgatgtgatcaag
acggcggactgggtcatcgacatgggccccgagggcggcaacggcggcggactggtcgtc
gccgaaggcacgccggaggagatcgcgtcggtcccagccagccacaccggcaagttcctg
cgggagatcctcggcgaccgcgtcagcgatgccacgacggtggcggcgccggcaaagaag
ccggtggccaagaaggtcgcggcgaagaagaccgcggccaagaagacaacggcgcgggcc
cgcggggcctcctga
DBGET
integrated database retrieval system
