Streptomyces inhibens: KI385_12535
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Entry
KI385_12535 CDS
T08140
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sine
Streptomyces inhibens
Pathway
sine03030
DNA replication
sine03410
Base excision repair
sine03420
Nucleotide excision repair
sine03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KI385_12535 (polA)
03410 Base excision repair
KI385_12535 (polA)
03420 Nucleotide excision repair
KI385_12535 (polA)
03440 Homologous recombination
KI385_12535 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sine03032
]
KI385_12535 (polA)
03400 DNA repair and recombination proteins [BR:
sine03400
]
KI385_12535 (polA)
Enzymes [BR:
sine01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KI385_12535 (polA)
DNA replication proteins [BR:
sine03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KI385_12535 (polA)
DNA repair and recombination proteins [BR:
sine03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KI385_12535 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KI385_12535 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UKY55171
LinkDB
All DBs
Position
complement(2688338..2690998)
Genome browser
AA seq
886 aa
AA seq
DB search
MDGHSMAYRAFFALPVENFTTVTGQPTNAIYGFASMLANTLRDEAPTHFAVAFDVSRKTW
RSEEFPDYKANRSKTPDEFKGQVELIGEMLDAMRVKRFAVEGFEADDVIATLTEQATAQG
FEVSIVTGDRDSFQLVSDNVTVLYPTKGVSELTRFTPEKVVEKYGLTPSQYPDFAALRGD
PSDNLPGIPGVGEKTATKWINQFGSFAELVERAEEVKGKAGANLREHLEAVKLNRRLTEM
VRDVELSCGPEALTREPYDREALTVFLNALEIRNQGLRDRLHSVDPGAEEAAEEATPAAG
VEVDGTVVGPGELAPWLAEHGTGPLGVSTVDAWSLGSGSVAEVALAAPDGPAAWFDPSQL
DEADEQAFAAWSADAARPKVMHNAKGLMRVFGEHGWRIDGVTMDTALAAYLVKPGRRSFA
LDALSIEYLGRDLAPAAAGDGQLAFGADEEAEADALMAQARTVLDLGTAFEAKLAEVGAA
ELLRDVELPTSELLARMERAGIAADRGWLERMEQQFAGAVQQAVQEAHAAVGHEFNLGSP
KQLQEVLFGELGLPKTKKTKTGYTTDADALAWLAAQTENELPVIMLRHREQAKLRTTVEG
LIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVRTDEGRAIRRSFVVGEGFESLLT
ADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTVASHVFSVGKDQVDPEMRRKIKAMSYG
LAYGLSAFGLSQQLGIQPDEARKLMDNYFERFGGVRDYLRRVVEEARATGYTETVLGRRR
YLPDLNSDNRQRREMAERMALNAPIQGTAADIVKIAMLRVDAALRAAKLKSRMLLQVHDE
IVVEVAPGEREKVEELVRREMAAAVELRAPLDVSVGSGKDWESAAH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcattccatggcataccgggcgttcttcgccctgcccgtggagaatttcacg
accgtcacgggacaaccgaccaatgcgatctacggcttcgcgtcgatgctcgcgaacacc
ctgcgcgacgaggcgcccacgcatttcgcggtggccttcgacgtctcgcgcaagacctgg
cgctccgaggagttcccggactacaaggcgaaccgctccaagacccccgacgagttcaag
ggccaggtcgagctgatcggcgagatgctcgacgcgatgcgggtcaagcggttcgcggtg
gagggcttcgaggccgacgacgtcatcgccacgctcacggagcaggccaccgcgcagggc
ttcgaggtctcgatcgtcaccggcgaccgcgactccttccagctggtctccgacaacgtc
acggtgctctaccccaccaagggcgtctcggagctgacgcgcttcaccccggagaaggtc
gtcgagaagtacggcctgaccccctcccagtaccccgacttcgcggcgctgcgcggcgac
ccgtccgacaacctccccggcatcccgggcgtcggtgagaagaccgccacgaagtggatc
aaccagttcggttcgttcgccgagttggtggagcgcgccgaggaggtcaagggcaaggcg
ggcgccaatctgcgtgagcacctggaggcggtgaagctcaaccgccgactgacggagatg
gtgcgcgatgtcgagctgtcgtgcggcccggaggcgctgacccgcgagccctacgaccgt
gaggcgctcacggtcttcctcaatgcgctggagatccgcaaccagggcctgcgggaccgg
ctgcactccgtcgacccgggcgccgaggaggccgccgaggaggccaccccggccgccggc
gtcgaggtggacggcacggtcgtcggtccgggcgaactcgctccgtggctggccgaacac
ggcaccggaccgctgggcgtgtccaccgtcgatgcttggagcctgggcagcggcagcgtc
gccgaggtggcgctggccgcccccgacggcccggccgcctggttcgacccgtcccagctc
gacgaggccgatgagcaggccttcgccgcctggagcgcggacgccgcccgacccaaggtg
atgcacaacgccaagggcctgatgcgggtcttcggcgagcacggctggcggatcgacggc
gtcaccatggacacggcgctggccgcctatctggtcaagcccggccgccgctccttcgcc
ctggacgccctgtccatcgaatacctcgggcgcgatctcgccccggccgcggccggcgac
gggcagctggcgttcggtgcggacgaggaggccgaggcggacgccctgatggcgcaggcg
cgcacggtcctcgacctggggacggccttcgaggccaagctcgcggaggtcggcgcggcc
gagctgctgcgcgatgtggagctgccgaccagcgagctgctggcccggatggagcgcgcc
ggtatcgccgcggaccggggctggctggagcggatggagcagcagttcgcgggcgcggtg
cagcaggccgtgcaggaggcgcatgccgccgtgggccatgagttcaacctgggctcgccc
aagcagctgcaagaggttctcttcggtgagctgggcctgcccaagaccaagaagaccaag
accggctacaccaccgacgccgacgcactggcctggctggccgcgcagaccgagaacgaa
ctcccggtgatcatgctcaggcaccgtgagcaggccaagctgcgcaccacggtcgagggc
ctgatcaagaccatcgccgcggacggccggatccacaccaccttcaaccagaccgtggcc
gccaccggccggctgtcctccacggaccccaacctgcagaacatcccggtgcgtacggac
gagggccgggcgatccgccgcagcttcgtcgtcggcgagggcttcgaatcgctgctgacc
gccgactacagccagatcgagctgcgggtgatggcccatctctccgaggacgagggcctg
atcgaggcgttcacctccggtgaggacctgcacaccaccgtcgcctcccatgtcttctcg
gtcggcaaggaccaggtcgacccggagatgcgccgcaagatcaaggcgatgtcctacggc
ctggcgtacggcctgtcggccttcggcctctcccagcagctgggcatccagcccgacgag
gcccgcaagctgatggacaactacttcgagcggttcggcggggtgcgcgactacctccgg
cgcgtggtggaggaggcccgcgccaccggctatacggagacggtgctcggccgccgccgc
tacctccccgacctcaacagcgacaaccgccagcgccgcgaaatggccgagcggatggcg
ctgaacgcaccgatccagggcaccgccgccgacatcgtcaagatcgcgatgctgcgggtc
gacgcggcactgcgcgcggcgaagctgaagtcgcggatgctgctccaggtccacgacgaa
atcgtcgtcgaggtggccccgggcgaacgcgagaaggtcgaggaactggtccgcagggag
atggccgcggcggtcgaactgagggccccgctggatgtctcggtcggctccggcaaggac
tgggagtcggcggcgcactga
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