Streptomyces inhibens: KI385_18625
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Entry
KI385_18625 CDS
T08140
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sine
Streptomyces inhibens
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sine03021
]
KI385_18625
Transcription machinery [BR:
sine03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KI385_18625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
Sigma70_ECF
HTH_24
HTH_3
MarR_2
MarR
DUF7343
IF2_N
NirdL-like_HTH
KORA
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
UKY50635
LinkDB
All DBs
Position
4079317..4080258
Genome browser
AA seq
313 aa
AA seq
DB search
MSPRLDELRTDDNIRQSASSTPLSDPTGHIPSQPLPAESESAGIPEIDDLPEIPPFDEVG
PVDARALSKTLFERLESLEEGTHEFAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQV
GTIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAG
DELAQKLDRAPTVHELAERLGITNDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIG
YEDHGLEGIEYVESLKPLIAELGPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSR
TLVRLRKGLMIEE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaactgcgcaccgacgacaacatccggcagtccgcatcgtcg
acacccctgtccgacccgaccgggcacatcccttcccagcccctccctgccgaatcagag
tcggcaggaatccctgagatcgacgatctgcccgagatcccgccgttcgacgaggtgggc
ccggtggacgcgagggctctgtccaagaccctcttcgagcggctcgaatcgctcgaggaa
ggcacgcacgaattcgcgtacgtccgcaacaccctggtcgagctcaatctggccctggtg
aagttcgcggcctcccggttccgctcccgcagcgagcccatggaggacatcgtccaggtc
ggcacgatcggcctgatcaaggcgatcgaccggttcgaactcagccgtggcgtcgagttc
ccgacgttcgcgatgccgaccatcgtcggcgagatcaagcgcttcttccgcgacaccagc
tggtcggtgcgcgtaccgaggcgtctgcaggaactgcgcctggaccttgccaaggcgggc
gacgaactggcccagaagctggaccgcgcccccacggtgcacgaactcgccgaacgcctc
ggaatcaccaatgacgaggtcgtcgaggggatggccgcgagcaacgcctacaccgcgagc
tcgctggacgcccagcccgaggaggacgacagcgaaggcgcgctggcggaccgcatcggc
tacgaggatcacggcctggagggcatcgagtacgtcgaatccctcaagccgctgatcgcc
gaactcggcccgcgcgaccgcaagattctctcgctgcgcttcgtcgccaatatgacgcag
tccgaaatcggcgaggagctgggcatctcccagatgcatgtctcccgtctgctctcccgc
acgctcgtacggctccgcaaggggctgatgatcgaggagtga
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