Streptomyces inhibens: KI385_24235
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Entry
KI385_24235 CDS
T08140
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sine
Streptomyces inhibens
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sine03021
]
KI385_24235
Transcription machinery [BR:
sine03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KI385_24235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
DUF7343
NirdL-like_HTH
HTH_3
HTH_24
MarR
HTH_37
DUF134
HTH_5
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
UKY51605
LinkDB
All DBs
Position
complement(5299639..5300448)
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AA seq
269 aa
AA seq
DB search
MTVTARTAPKAPSRESRSADTRALTQVLFAELTDLEPGTPEHTRVRAALIEANLPLVRYA
AARFRSRNEPMEDVIQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTV
HVPRRLHELWVQVNGATEDLTVLHGRSPTTAEIAERLKIGEDEVLACLEAGRSYHATSLE
AAQEGDGLPGLLDRLGYEDPELAGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQIS
AELGVSQMHVSRLLSRSFARLRSANRIEA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgacggcccgtactgcgcccaaggctccatcccgcgagagccggagcgcggac
acgcgggcgctcacacaggtgctgttcgcggagctgacggacctcgaacccggcaccccc
gagcacacccgcgtccgtgccgcactcatcgaagccaatctgccgctggtccgctatgcc
gcggcgcgcttccgcagccgtaatgagccgatggaggacgtcatccaggtcggcaccatc
ggcctgatcaatgcgatcgaccggttcgatccggaccggggcgtccagttccccaccttc
gcgatgccgaccgtcgtcggcgagatcaaacgctactttcgagacaatgtccgcaccgtc
catgtgccgcgccgcctccacgagctgtgggtgcaggtcaacggcgcgaccgaggatctg
acggtgctgcacggccgctcccccaccaccgccgagatcgccgagcgcctgaagatcggc
gaggacgaggtgctggcgtgcctggaggccggccggtcgtatcacgccacatcgctggag
gccgcccaggagggcgacggcctgcccggcctgctggaccgcctcggttacgaggacccg
gagctggccggcgtggagcaccgtgacctcgtacggcacctcctcgtccagctgcccgag
cgcgagcagcggatccttctgctgcgttactacagcaatctgacgcagtcgcagatcagt
gcggagctaggggtgtcgcagatgcatgtgtcgcggctactgtcgcggagcttcgcccgg
ctgcgatccgcaaacaggatcgaggcttaa
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