Streptomyces inhibens: KI385_25050
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Entry
KI385_25050 CDS
T08140
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sine
Streptomyces inhibens
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sine03032
]
KI385_25050 (topA)
03400 DNA repair and recombination proteins [BR:
sine03400
]
KI385_25050 (topA)
Enzymes [BR:
sine01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KI385_25050 (topA)
DNA replication proteins [BR:
sine03032
]
Prokaryotic type
DNA Topoisomerases
KI385_25050 (topA)
DNA repair and recombination proteins [BR:
sine03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KI385_25050 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UKY51752
LinkDB
All DBs
Position
5468770..5471646
Genome browser
AA seq
958 aa
AA seq
DB search
MSPTNEATEGGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPAKYKG
EPWARLGVNVDADFQPIYVVNSDKKDQVKKLKELLAESDELYLATDEDREGEAIAWHLQE
ILKPKVPVHRMVFHEITKDAIREAVANPRELNQKLVDAQETRRILDRLYGYEVSPVLWKK
VMPRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGIFATGRAGWGSPRASEAEAGGA
SDPSTLTARLNTVDGRRIAQGRDFGPNGQLKTDVLHLDEANARALAAALENTDFAVRSVE
SKPYRRSPYAPFRTTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAV
AAARAQVTHLYGANYLPDKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLY
ELIWKRTVASQMKDATGNSVTVKIGGRAADGRDVEFSASGKTITFHGFLKAYVEGADDPN
AELDDRERRLPQVAEGDALAAREITADGHATKPPARYTEATLVKELEEREIGRPSTYASI
IGTILDRGYVFKKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQA
VPWLRRFYFGEGEAEGAASDAGNGDGDHLGGLKELVEDLGAIDAREISSFPVGDDITLRV
GRYGPYVERGEKDSEGHQRADVPDDLAPDELTVEYAEELLAKPSGDFELGMDPESGHQIV
AKDGRYGPYVTEILPEGTPKTGKNAVKPRTASLFKSMSLDTVTLEDALKLMSLPRVVGKD
AEGVEITAQNGRYGPYLKKGTDSRSLENEEQLFTITLDEALVIYAQPKQRGRAAAKPPLK
ELGTDPVSGKPVVVKDGRFGAYVTDGETNATLRRDDDVETITAERGYELLAEKRAKGPAK
KTAKKAAAKKAPAKKTAAKKTAAKKTAAKKTTTAKKTTAKKATAKTAAAKKTAASTED
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccaacgaagccacagagggcggcggccgccgacttgtcatcgtcgagtcg
cctgccaaggcgaagacgatcaagggctacctcggccctggctatgtggtcgaggccagc
gtggggcacatccgcgacctgcccaatggcgcggcagaggtcccggcgaagtacaagggc
gagccctgggcccggctcggcgtgaacgtcgacgccgacttccagccgatctatgtggtc
aacagcgataagaaggaccaggtcaagaagctcaaggagctgctggccgaatccgacgag
ctctacctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggag
atcctcaagcccaaggtcccggtccaccggatggtcttccacgagatcaccaaggacgcg
atccgcgaggccgtggccaatccgcgcgagctgaaccagaagctggtcgacgcccaggag
acccgccggatcctcgaccgcctctatggctacgaggtctcgccggtcctgtggaagaag
gtcatgccgcggctgtcggccggccgggtgcagtccgtcgcgacccgtctcgtcgtcgag
cgggagcgcgagcgcatcgccttccgctccgccgagtactgggacctgaccggcatcttt
gccaccggccgggccggatgggggtccccccgggcgagcgaagccgaggctgggggagcc
agcgacccctcgacgctgaccgcccggctgaacaccgtcgacggccgccgtatcgcccag
ggccgcgacttcggccccaacgggcagctgaagaccgatgtgctccatctggacgaagcg
aacgcccgcgcgctcgccgccgccctggagaacaccgacttcgcggtgcgctcggtcgag
tccaagccgtaccgccgctcgccgtacgccccgttccgtacgaccaccctccagcaggag
gccagccgcaagctcggcttcggcgccaaggccaccatgcaggtggcgcagaagctgtac
gagaacggcttcatcacctatatgcgtacggactccaccacgctctcggacaccgcggtc
gccgcggcccgggcgcaggtgacgcatctgtacggcgcgaactacctgccggacaagccg
cgcacgtacgccggcaaggtcaagaacgcccaggaggcgcacgaggcgatccgcccctcc
ggcgaccgcttccgtacccccgcggagaccggtctgaccggcgaccagttcaagctctac
gagctgatctggaagcggaccgtcgcctcccagatgaaggacgcgaccggtaactccgtc
accgtcaagatcggtggccgggccgccgacggccgggacgtcgagttcagcgcgtccggc
aagacgatcaccttccacggcttcctgaaggcctacgtggagggcgccgacgacccgaac
gcggagctggacgaccgcgagcgccggctgccgcaggtcgccgagggcgatgcgctggcc
gcacgggagatcaccgccgacgggcacgccaccaagccgcccgcccgctacaccgaggcc
acgctggtcaaggagctggaagagcgcgagatcggccgcccgtcgacgtatgcgtcgatc
atcggcacgatcctcgaccgcggctatgtcttcaagaagggcaccgcgctcgtcccgtcg
ttcctctccttcgcggtggtcaacctcctggagaagcacttcggccggctggtcgactac
gacttcaccgccaagatggaggacgatctcgaccgcatcgcccgcggtgaggcgcaggcc
gtgccgtggctgcggcgcttctacttcggcgagggcgaggccgagggggccgcgtcggac
gccggcaacggcgacggcgaccacctcggcgggctgaaggagctggtcgaggacctgggc
gcgatcgacgcccgggagatctcgtccttcccggtcggcgacgacatcacgctgcgggtc
ggccgctacggcccgtacgtcgagcgcggcgagaaggactccgagggacatcagcgcgcc
gatgtccccgacgatctcgcgcccgacgagctgacggtggagtacgcggaggaactgctg
gccaagccgagcggcgacttcgagctgggcatggatccggagagcggccaccagatcgtc
gccaaggacggccgctacggcccgtacgtcaccgagatcctgcccgagggcaccccgaag
acgggcaagaacgcggtcaagccgcgcaccgcctcgctcttcaagtcgatgtccctggac
acggtgaccctggaggacgcgctcaagctgatgtcgctgccgcgcgtcgtcggcaaggac
gccgagggcgtggagatcaccgcgcagaacggccgctacggcccgtacctcaagaagggc
accgactcgcgctccctggagaacgaggagcagctcttcacgatcaccctcgacgaggcg
ctggtgatctacgcacagcccaagcagcgcggacgggccgccgccaagccgccgctgaag
gagctgggcacggacccggtgagcggcaagccggtggtggtcaaggacggccgcttcggt
gcgtatgtcaccgacggcgagaccaatgcgacgctgcggcgggacgacgacgtcgagacg
atcaccgccgagcggggttacgagctgctggcggagaagcgcgccaaggggccggccaag
aagaccgcgaagaaggcggcggccaagaaggcgccggcgaagaagacggccgcgaagaag
acggccgccaagaagaccgcggcgaagaagacgaccacggcgaagaagacgaccgccaag
aaggccaccgccaagacggcggcggcgaagaagacggcggcgtcgaccgaggactga
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