Streptomyces inhibens: KI385_25250
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Entry
KI385_25250 CDS
T08140
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sine
Streptomyces inhibens
Pathway
sine00521
Streptomycin biosynthesis
sine00523
Polyketide sugar unit biosynthesis
sine00541
Biosynthesis of various nucleotide sugars
sine01100
Metabolic pathways
sine01110
Biosynthesis of secondary metabolites
sine01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KI385_25250 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KI385_25250 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KI385_25250 (rfbC)
Enzymes [BR:
sine01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KI385_25250 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4913
Motif
Other DBs
NCBI-ProteinID:
UKY51789
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Position
5519623..5520225
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AA seq
200 aa
AA seq
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MRPLGIRGAWLQEPNLFPDSRGSFHEWFRSAAFRKETGHDLNLTQANCSVSRRGTLRGVH
FADVPPSQAKYVKCVRGAILDVTIDIRVGSPTYRRWEAVRLDDRNHRAVYLAEGLGHAFM
ALTDDATVVYLCTEGYAPERERDINPFDPDLAIEWPADIAAVLSEKDAAAPSLKEAEAAG
LLPDYADCLAYYEKLRSAGN
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccttgggaatccgcggcgcgtggctgcaggagccgaatctcttcccggacagc
cggggaagcttccacgaatggttccgcagcgccgcgttccgcaaggagacgggacacgac
ctgaatctcacgcaggccaactgttcggtctcccgccgcggcacacttcgcggcgtgcac
ttcgcggacgtgccgcccagccaggccaagtacgtcaagtgcgtccggggcgcgatcctc
gacgtgaccatcgacatcagggtcggctctcccacgtaccgccgatgggaagccgtgcgg
ctggacgaccgaaatcaccgcgcggtgtacctcgccgaggggctggggcacgccttcatg
gccctgaccgacgatgcgacggtcgtctacctgtgcaccgagggctacgccccggagcgc
gaacgcgacatcaacccgttcgaccccgacctggccatcgaatggccggccgacatcgcg
gccgtgctctccgagaaggacgcggcagcgccctccctcaaggaggccgaggccgccggg
ctgcttcccgactacgccgattgcctggcgtactacgaaaaactccgctccgcagggaac
tga
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